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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56589.1
DDBJ      :             putative oxygenase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  224/915 : Eukaryota  47/199 : Viruses  0/175   --->[See Alignment]
c.1.16
:455 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->442 1tvlA PDBj 3e-70 42.4 %
:RPS:PDB   6->453 3b9oA PDBj 3e-63 31.7 %
:RPS:SCOP  5->443 1tvlA  c.1.16.4 * 4e-94 40.2 %
:HMM:SCOP  4->443 1tvlA_ c.1.16.4 * 4.5e-107 35.5 %
:RPS:PFM   40->287 PF00296 * Bac_luciferase 2e-18 36.7 %
:HMM:PFM   27->390 PF00296 * Bac_luciferase 9.3e-60 31.6 282/307  
:BLT:SWISS 1->442 YXEK_BACSU 2e-85 42.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56589.1 GT:GENE BAD56589.1 GT:PRODUCT putative oxygenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1895410..1896777) GB:FROM 1895410 GB:TO 1896777 GB:DIRECTION - GB:PRODUCT putative oxygenase GB:PROTEIN_ID BAD56589.1 LENGTH 455 SQ:AASEQ MTRPRKQVHLAAHFPGVNNTTVWSDPDSGSQIDFASFEHLARTAERGLFDFFFLAEGLRLREHRGRIHDLDVVGRPDTFTVLNALAGVTDRLGLAGTINSTYNEPFELAKQFASLDHLSGGRAAWNVVTSSDAFTGENFRRGGYLEHADRYRRAAEAVELSRALWDSWPADALVVDRAAGVFARAIPETRYRGSQFDIAAPFVLPPSPQGHPVLLQAGDSDEGREFGAAAADAIFTVHGTLAAGRAFYADVKGRLAKYGRKPEHLKIFPAATFVLGDTAEEAQERARHIRLQQVGPQTALAFLEQVWGRDLSGYDPDGPLPDLEPTGDVEITRGRVRHAKDPRAVAAAWREKAAAEGLSIRELVIEVTARQQFVGTPAQVAAEIDEYVQTDAADGFILVPHLTPAGLDEFVDRVVPELQDRGSFRTEYRGATLRDHLGLPHPHRHRTAPEGARAS GT:EXON 1|1-455:0| BL:SWS:NREP 1 BL:SWS:REP 1->442|YXEK_BACSU|2e-85|42.0|426/441| SEG 344->355|avaaawrekaaa| BL:PDB:NREP 1 BL:PDB:REP 8->442|1tvlA|3e-70|42.4|377/390| RP:PDB:NREP 1 RP:PDB:REP 6->453|3b9oA|3e-63|31.7|417/433| RP:PFM:NREP 1 RP:PFM:REP 40->287|PF00296|2e-18|36.7|215/296|Bac_luciferase| HM:PFM:NREP 1 HM:PFM:REP 27->390|PF00296|9.3e-60|31.6|282/307|Bac_luciferase| RP:SCP:NREP 1 RP:SCP:REP 5->443|1tvlA|4e-94|40.2|383/390|c.1.16.4| HM:SCP:REP 4->443|1tvlA_|4.5e-107|35.5|422/0|c.1.16.4|1/1|Bacterial luciferase-like| OP:NHOMO 951 OP:NHOMOORG 272 OP:PATTERN ------------------------------2------------------------------------- 1---5---222---665----4--2L------34447CJE-E-4C14--33176511---21--4146-41-----------1-------------------------1-----------------------------------1-------1--------------4-5-------------1---------2------1------1-2---12--2--122--11111--6---------------111-3------------------------------------------------------------------------------------------------------------------------1--3--------9-55F------------------2-32433236491-UB9D75-776227411---5-1-----2-222222----2----------------------------------15--3----3777735555333427777-453J2222--1---11--43-23--3--3-2--------------------------------------------5--------------2----------------------------------------------------------121-211111111111-1111111111111111111-422211-----------------2---111------------------------------------------------2222215---F15535176B16941-766------------------------112---------------------------------------------------------------------- -------------1-352-53326365-------------------224423A3231133336-1-11-2---22-----322223------5---------1-----1-------------------------------------------------1----1-------------------------2--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 439 STR:RPRED 96.5 SQ:SECSTR ##cTTcccEEEEEEEccccTTGGGcTTccGGGcHHHHHHHHHHHHHTTccEEEEEccccccccGGGccHHHHHTTcccGGGHHHHHHTccccEEEEEEEcccccHHHHHHHHHHHHHHTTccEEEEEEccccHHHHHHTTccccccHHHHHHHHHHHHHHHHHHHHcccTTcEEEETTTTEEEcGGGcccEEccccEEccccccccccccccEEEEEcccHHHHHHHHHHccEEEEccccHHHHHHHHHHHHHHHGGGTccGGGcEEEEEEEEEEcccHHHHHHHHHHHTHHHccHHHHHHHHHHHHcccGGGccTTcccccccHHHHHHHHTcccTTGGGG############cccHHHHTccTTccccEEEEEcHHHHHHHHHHHHHHHcccEEEEEcccTTHHHHHHHHHHHHHHHHTTccccccccccHHHHHHcTTcccccTTcGGGG## DISOP:02AL 1-4, 329-343, 448-455| PSIPRED cccccccEEEEEEEcccccccccccccccccccHHHHHHHHHHHHHccccEEEEEccccccccccccccccccccccHHHHHHHHHHccccEEEEEEEEcccccHHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccEEEEcccEEcccccccccEEEEEcccHHHHHHHHHHccEEEcccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEEEEccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHccccHHHHHHHcccccEEEccHHHHHHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHHHHHcccccccccccccHHHcccccccccccccHHcccc //