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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56590.1
DDBJ      :             putative oxygenase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  172/915 : Eukaryota  45/199 : Viruses  0/175   --->[See Alignment]
c.1.16
:383 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   13->215 1tvlA PDBj 4e-25 29.1 %
:RPS:PDB   1->300 3b9nB PDBj 4e-24 21.9 %
:RPS:SCOP  13->298 1tvlA  c.1.16.4 * 2e-46 23.8 %
:HMM:SCOP  6->370 1tvlA_ c.1.16.4 * 1.3e-67 34.1 %
:RPS:PFM   41->215 PF00296 * Bac_luciferase 2e-04 30.1 %
:HMM:PFM   35->328 PF00296 * Bac_luciferase 5.1e-41 31.7 259/307  
:BLT:SWISS 13->300 YXEK_BACSU 1e-38 30.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56590.1 GT:GENE BAD56590.1 GT:PRODUCT putative oxygenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1896774..1897925) GB:FROM 1896774 GB:TO 1897925 GB:DIRECTION - GB:PRODUCT putative oxygenase GB:PROTEIN_ID BAD56590.1 LENGTH 383 SQ:AASEQ MAQPQHRPAFFHGIELVGTGAHPASWRRADSRAEDLFGAPYWVSAITAAERAGLDAVFLPDSFGLQPGGPAVVRGRLDAVAVAARAAAATARIGLVPQVTVTHTEPFHVSKAVAALDFATRGRAGWEVAVSPGAAQAKAFGRKGPQEAVQLWHEADDAIEVVTRLWDSWEDDAEIRDVATGRFIDRDKLHYIDFVGEYFSVKGPSITPRSPQGQPVVAVRADDAAAIGVAVRRADLIRIAPPDLDAAHARRTALRQAALGAGRDPDTLTVLLDLDVHLAERAEDAHAELQQLDRWAAPSIRPAATGLRHIGTPGSLRQLLADLAGSGAADGVVLRPLAVPAALRLLASDPPDPTGAAGSLRERLGLPRPPSRYAAARTEGTPS GT:EXON 1|1-383:0| BL:SWS:NREP 1 BL:SWS:REP 13->300|YXEK_BACSU|1e-38|30.9|288/441| SEG 71->92|avvrgrldavavaaraaaatar| SEG 216->235|vvavraddaaaigvavrrad| SEG 264->276|dpdtltvlldldv| SEG 319->347|lladlagsgaadgvvlrplavpaalrlla| BL:PDB:NREP 1 BL:PDB:REP 13->215|1tvlA|4e-25|29.1|203/390| RP:PDB:NREP 1 RP:PDB:REP 1->300|3b9nB|4e-24|21.9|297/434| RP:PFM:NREP 1 RP:PFM:REP 41->215|PF00296|2e-04|30.1|146/296|Bac_luciferase| HM:PFM:NREP 1 HM:PFM:REP 35->328|PF00296|5.1e-41|31.7|259/307|Bac_luciferase| RP:SCP:NREP 1 RP:SCP:REP 13->298|1tvlA|2e-46|23.8|286/390|c.1.16.4| HM:SCP:REP 6->370|1tvlA_|1.3e-67|34.1|364/0|c.1.16.4|1/1|Bacterial luciferase-like| OP:NHOMO 707 OP:NHOMOORG 218 OP:PATTERN ------------------------------1------------------------------------- ----5---221---564----4--2I------23336AFB-D-4B12--22165411---21--3-35-41-------------------------------------------------------------------------1----------------------4-3-----------------------2---------------1---12-----111--11111--6---------------111-3---------------------------------------------------------------------------------------------------------------------------1--------8-53A------------------2-2142222437--Q86A54-6662253-----4-1-----2-222222----1----------------------------------12--2----2555523444311425555-233F2-21----------3--12--3--3-1--------------------------------------------5--------------1-----------------------------------------------------------11-11-------------------------------4211-1-----------------2------------------------------------------------------2222212---C13323153814631-444------------------------112---------------------------------------------------------------------- -------------1-331-42326364-------------------11442392221-22226-1-11-1---22-----222221------3---------1-----1-------------------------------------------------1------------------------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 311 STR:RPRED 81.2 SQ:SECSTR cccccEEEEEEEcEEEccccccTTGGGcTTccGGGTTcHHHHHHHHHHHHHTTccEEEEEccccccccGGGccHHHHHTTccccccccGGGHcEEEEEEEcccccHHHHHHHHHHHHHHTTccEEEEEEccccHHHHHHTTccccccHHHHHHHHHHHHHHHHHHHHcccTTcEEEETTTTEEEcGGGcccccEEccccEEcccccccccTTcccEEEEccccHHHHHHHHHHccEEEcccccHHHHHHHHHHHHHHTGGGTccGGGcEEEEEEEEEEcccHHHHHHHHHHHHTTccHHHHHHHHHHHHHT######################################################################## DISOP:02AL 1-5, 376-383| PSIPRED cccccccHHHHccEEEccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEEccccccccccccccccHHHHHHHHHHcccccEEEEEEEcccccHHHHHHHHHHHHHHHccEEEEEEEEcccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccEEEEccccccccccccccEEEEEcccHHHHHHHHHHccEEEcccccHHHHHHHHHHHHHHHHHHcccHHHEEEEEEEEEEEcccHHHHHHHHHHHHHHHcHHHHHHHHHccccccHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHccHHHccccHHHHccccccHHHHcccccccccc //