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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56593.1
DDBJ      :             putative peptide transporter
Swiss-Prot:             

Homologs  Archaea  29/68 : Bacteria  639/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:331 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  149->282 2onkC1  f.58.1.1 * 4e-07 11.3 %
:HMM:PFM   118->311 PF00528 * BPD_transp_1 2.2e-30 29.3 181/185  
:BLT:SWISS 3->286 Y209_BRUME 6e-32 31.9 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56593.1 GT:GENE BAD56593.1 GT:PRODUCT putative peptide transporter GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1900493..1901488) GB:FROM 1900493 GB:TO 1901488 GB:DIRECTION - GB:PRODUCT putative peptide transporter GB:PROTEIN_ID BAD56593.1 LENGTH 331 SQ:AASEQ MTMARYLISRVLQALWVLWAAFTLSFVVLYLLPADPVAIAADAGGTGTPVDQAAIAELQARYGLDRPLWEQYGTALTHAVRGDLGYSIASGRPVTTAIGAVLPATLALASLALALAVAGGVIVAFAATYTRRPWLRGVLTALPPMGVSVPTFWTGLILLQLFSFHWRLAPAFGGDGLRGTLLPAITLAVPIGAVLAQVLTAGLESTWRQPFTEVALAKGASRWWVQRRHVARPAAIPTLTIGGVLVGNLLAGSVVVETVFAREGLGRLTQTSVLAQDIPVVQGIVMVTALVFVSVNLVVDLVYPLLDPRITTTGGGRVPSAAGREEVPAGV GT:EXON 1|1-331:0| BL:SWS:NREP 1 BL:SWS:REP 3->286|Y209_BRUME|6e-32|31.9|279/315| TM:NTM 6 TM:REGION 13->35| TM:REGION 101->123| TM:REGION 139->161| TM:REGION 181->203| TM:REGION 234->256| TM:REGION 279->301| SEG 100->127|avlpatlalaslalalavaggvivafaa| SEG 287->308|vtalvfvsvnlvvdlvyplldp| HM:PFM:NREP 1 HM:PFM:REP 118->311|PF00528|2.2e-30|29.3|181/185|BPD_transp_1| RP:SCP:NREP 1 RP:SCP:REP 149->282|2onkC1|4e-07|11.3|133/252|f.58.1.1| OP:NHOMO 2290 OP:NHOMOORG 670 OP:PATTERN 22-1---1---------1------2224321212---1-----112-4--A84-2-111----12--- -1-27332111-31112----1--17-----132221457-9266D612332494112--221263544612111333222-4-1--------------------11--111111111111111111111111121233532214822--22112------112221321-----11--1-1172122341423555553352325334A55553543214B521222222E4144424424444444222221111331--1-11--2211111-1113332222-11-11-------11111111111111111---11111A262333334313221111111331427-1119941--182-2131-543-1-----1--121EEM--47439-8999899799H-33A3273BMI--bIISCC8NKFJJI3-1148973774681111111123321116-------------------------------11--AD9BA44445423333337633331343B5396--223-133342A59M13--1211-----------11-225111242232221111111211----121--111-------111111111-2-1111421-11----1-----1-2------11-----11--1------55EA3545554544455-5555544555545554554788A82234443444334434334554444452-222222212222---------------538333-12222124112---------241-1-111-214222-5771----1---112242222234244--1--------------2------111111115---1-----------------------1223249442112 --------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------1------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 312-331| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHccccccccccccccccccc //