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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56596.1
DDBJ      :             putative glycosyltransferase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  6/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.68.1
:382 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   22->55 2d0jD PDBj 8e-04 11.8 %
:RPS:SCOP  6->56 1xhbA2  c.68.1.17 * 4e-06 11.8 %
:HMM:SCOP  21->249 1xhbA2 c.68.1.17 * 1.3e-29 30.5 %
:HMM:PFM   23->164 PF00535 * Glycos_transf_2 2.2e-17 28.4 116/169  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56596.1 GT:GENE BAD56596.1 GT:PRODUCT putative glycosyltransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1904064..1905212) GB:FROM 1904064 GB:TO 1905212 GB:DIRECTION - GB:PRODUCT putative glycosyltransferase GB:PROTEIN_ID BAD56596.1 LENGTH 382 SQ:AASEQ MATVNRVTMPRLSPGVPVLEPVTVCVPARDEADRLPALIADLRAQVGVPRLRVLILDDASTDDTAAVARAAAGGDPRITVLRSTTPPPPGWTGKAAACAALARAVAAQDRAGRDPVDDSDEDTGGGAATLIFLDADVRLAPEAVAAAVAQVRRGGAALVSPWPWQRAGTPAEALVQPLLCWSWAATLPVVLGNRSRRPSTAVACGQFLAFDAAAYGAIGGHAAVAGSATEDLDLARTLRRAGYRTRVVAAGGLASTRMYRGGAELAAGYTRWLWSAYGGSPAAAAAVGIAAALAFWVPPAAALLGRGGVRRVGAVGYAAAVVSRLLARRVETGAAPRAADLLAAAAHPVAVAAYQVLVVRSHRARRRGRLRWKGRALTGVRG GT:EXON 1|1-382:0| TM:NTM 2 TM:REGION 280->302| TM:REGION 340->361| SEG 57->75|ddastddtaavaraaaggd| SEG 95->113|aaacaalaravaaqdragr| SEG 135->159|advrlapeavaaavaqvrrggaalv| SEG 212->228|aaaygaigghaavagsa| SEG 276->330|ayggspaaaaavgiaaalafwvppaaallgrggvrrvgavgyaaavvsrllarrv| SEG 334->353|aapraadllaaaahpvavaa| SEG 363->377|rarrrgrlrwkgral| RP:PDB:NREP 1 RP:PDB:REP 22->55|2d0jD|8e-04|11.8|34/241| HM:PFM:NREP 1 HM:PFM:REP 23->164|PF00535|2.2e-17|28.4|116/169|Glycos_transf_2| RP:SCP:NREP 1 RP:SCP:REP 6->56|1xhbA2|4e-06|11.8|51/316|c.68.1.17| HM:SCP:REP 21->249|1xhbA2|1.3e-29|30.5|203/0|c.68.1.17|1/1|Nucleotide-diphospho-sugar transferases| OP:NHOMO 6 OP:NHOMOORG 6 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1-11----1-------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 34 STR:RPRED 8.9 SQ:SECSTR #####################EEEEEEEcccTTHHHHHHHHHHHHTTcTTEEEEE####################################################################################################################################################################################################################################################################################################################################### DISOP:02AL 8-17, 379-382| PSIPRED ccccccccccccccccccccEEEEEEEccccHHHHHHHHHHHHHccccccEEEEEEEccccccHHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHHHccccEEEEEEEEccccHHHHHHHHHHHHHHHHHccHHHccccccccEEEEcccEEEEEHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccEEEEEccccEEEEEccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEccccccccccc //