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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56597.1
DDBJ      :             putative lipoprotein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  27/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:253 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   37->198 PF11353 * DUF3153 7e-08 30.4 %
:HMM:PFM   29->222 PF11353 * DUF3153 7.9e-08 19.4 180/209  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56597.1 GT:GENE BAD56597.1 GT:PRODUCT putative lipoprotein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1905275..1906036) GB:FROM 1905275 GB:TO 1906036 GB:DIRECTION - GB:PRODUCT putative lipoprotein GB:PROTEIN_ID BAD56597.1 LENGTH 253 SQ:AASEQ MCAVRSSAATTPGAGAPRRTRVRVASAVLLAALLVPMLAGCLRVQVSMGVSSNDRVSGRIVAAVVPASPDDKGPQLKAPDSLAAKVRVEPYNQDGYVGSKVFFEDLSFGDVQQLSQLNEQAQGMLQLQFQRTGDLVSLNGRVDLKSVPPHGSDVQFTIAFPSRVAKTNGTREGDNTVSWKLPPGEVSTLRAEVGYADPNTRSFAGWAGIVGGITLAVAAIVAAMAYMNRNPTPPVPEHQFSWRRWWQSVKQFR GT:EXON 1|1-253:0| TM:NTM 2 TM:REGION 23->45| TM:REGION 204->225| SEG 18->35|rrtrvrvasavllaallv| SEG 207->225|agivggitlavaaivaama| RP:PFM:NREP 1 RP:PFM:REP 37->198|PF11353|7e-08|30.4|158/210|DUF3153| HM:PFM:NREP 1 HM:PFM:REP 29->222|PF11353|7.9e-08|19.4|180/209|DUF3153| OP:NHOMO 27 OP:NHOMOORG 27 OP:PATTERN -------------------------------------------------------------------- --------------11111-11111111111111111111------------------------1-1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-20, 67-76| PSIPRED ccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEEEEccccccccEEEEEEcccccccccccccccccHHHEEEEcccccccEEcHHHHHHcccHHHHHHHHccccccccEEEEEEEEcccEEEEEccccccccccccccEEEEEEcccEEEccccccccccEEEEEEcccEEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHcc //