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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56617.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  772/915 : Eukaryota  141/199 : Viruses  0/175   --->[See Alignment]
c.1.6
:251 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   30->245 1w8gA PDBj 2e-28 34.8 %
:RPS:PDB   28->249 3b8uA PDBj 4e-21 15.9 %
:RPS:SCOP  32->244 1b54A  c.1.6.2 * 3e-19 28.4 %
:HMM:SCOP  8->244 1ct5A_ c.1.6.2 * 4.5e-71 45.3 %
:RPS:PFM   142->246 PF01168 * Ala_racemase_N 4e-10 49.5 %
:HMM:PFM   23->247 PF01168 * Ala_racemase_N 2.6e-46 40.4 193/214  
:BLT:SWISS 39->250 Y2172_MYCBO 5e-56 54.2 %
:PROS 93->107|PS01211|UPF0001
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56617.1 GT:GENE BAD56617.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1928565..1929320 GB:FROM 1928565 GB:TO 1929320 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56617.1 LENGTH 251 SQ:AASEQ MSGAAGTPVADAVAARAAELSANLDALLARIEAACRASGRAPDSVRMLPVTKFFPARDVAILHDLGLREFGESREQEASAKVAELSGLDGIAWHMIGRLQRNKAKVVARWAHTVHSVDSERLATALDRGACAALAAGERAEPVRVLVQVSLDADPARGGVVPAELDALADRIAAAEGLQLAGLMAIPPLDAEPDSAFALLETLHTRILARHPGARELSAGMSGDLESAIAHGSTCVRVGTALMGARPITSG GT:EXON 1|1-251:0| BL:SWS:NREP 1 BL:SWS:REP 39->250|Y2172_MYCBO|5e-56|54.2|212/258| PROS 93->107|PS01211|UPF0001|PDOC00931| SEG 4->26|aagtpvadavaaraaelsanlda| SEG 123->141|ataldrgacaalaagerae| BL:PDB:NREP 1 BL:PDB:REP 30->245|1w8gA|2e-28|34.8|210/226| RP:PDB:NREP 1 RP:PDB:REP 28->249|3b8uA|4e-21|15.9|207/358| RP:PFM:NREP 1 RP:PFM:REP 142->246|PF01168|4e-10|49.5|103/211|Ala_racemase_N| HM:PFM:NREP 1 HM:PFM:REP 23->247|PF01168|2.6e-46|40.4|193/214|Ala_racemase_N| RP:SCP:NREP 1 RP:SCP:REP 32->244|1b54A|3e-19|28.4|208/230|c.1.6.2| HM:SCP:REP 8->244|1ct5A_|4.5e-71|45.3|232/0|c.1.6.2|1/1|PLP-binding barrel| OP:NHOMO 973 OP:NHOMOORG 916 OP:PATTERN -------------------------------------------------11-1--------------- 1111111111111111111-11111211111111111111111111111111111111--111111111111111111111111111111111111---11211121211--------------1111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111------------11--------1111111111111111111111111111111111111111111111111111111111111121111111111-11111111111111111111-11111111111111111111112121111111111112-1111111111111111111111111111111111111111111111111111112-----------------------------111111222121111111111111111111111111111-111211111211111121211111111111111111111-11111111111111111111111112111--------1------------1-1111111111111111111111111111111111--111111--11111211211111111111-11111111111111111111112211111111111111111111111111111111111111111--111111111111111111111111111111111111111111111111111111111111111111111111111111111111221111111111111111--------------1-1-------------------------1111111111111 ----111-3111-111-11111111--11------11---------111111-1111-1111111111--111111111111111111-121-11-1-1-1--11--1--11-1112--1-11-21111241-1111-1121111-1---11---111122-1111-111-11311-11F1111121-11311111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 223 STR:RPRED 88.8 SQ:SECSTR ##########################HHHHHHHHHHHHHHHcTTcEEEEEcHHHHHTTcHHHTcTTccEEEEccHHHHHHHHHHTcccccccEEETTccccGGGHHHHHHTTEEEEEccTTTHHHHTTccccHTccccHHHccccEEEEEcccccccccccGGGHHHHHHHHTTcTEEEEEEEEcccccTTcTTccHHHHHHHHHHHHHTTTcccccccccHHHHHHcGGGcccEEcccGGGGTccccc## DISOP:02AL 1-14, 249-251| PSIPRED ccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccHHHHHHHHHHccHHcccccHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHccccEEEEcccHHHHHHHHHHHHHHHHHHHcccccEEEEEEEcccccccccccHHHHHHHHHHHHHcccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHcccccEEcccccHHHHHHHHHcccEEEEcHHHccccccccc //