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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56620.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  65/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:281 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   129->253 3dmqA PDBj 1e-06 18.6 %
:RPS:PFM   3->65 PF05103 * DivIVA 2e-04 51.7 %
:HMM:PFM   3->65 PF05103 * DivIVA 1.7e-15 43.3 60/131  
:HMM:PFM   117->162 PF05103 * DivIVA 7.6e-06 32.6 46/131  
:HMM:PFM   156->224 PF06188 * HrpE 0.00026 28.8 66/191  
:BLT:SWISS 1->266 AG84_MYCTU 2e-79 63.6 %
:COIL
:REPEAT 3|130->151|152->173|174->195
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56620.1 GT:GENE BAD56620.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1930729..1931574 GB:FROM 1930729 GB:TO 1931574 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56620.1 LENGTH 281 SQ:AASEQ MPLTPADVHNVAFSKPPIGKRGYNEDEVDAFLDLVEQELSRLIEENADLRQRVAELDAELADAKKNRPAGPATVKAPVPQPQPQPEPIKPPVPAAPPAPVAAAPAKDTSADANLQAAKVLSLAQEMADRLTSDAKSEAENLLSNARANSERLVTDARTRSEAMIADARQKADAMLSDAQTRSDNQLRQAKEKAEALQADAERKHTEIMATITQQRSVLESRIEQLKTFEREYRVRLKSYLESQLEELENRGSAVPVDGGDAFADSGTGTNLAPASFAKGGK GT:EXON 1|1-281:0| BL:SWS:NREP 1 BL:SWS:REP 1->266|AG84_MYCTU|2e-79|63.6|250/260| COIL:NAA 88 COIL:NSEG 2 COIL:REGION 31->67| COIL:REGION 169->219| NREPEAT 1 REPEAT 3|130->151|152->173|174->195| SEG 71->106|patvkapvpqpqpqpepikppvpaappapvaaapak| RP:PDB:NREP 1 RP:PDB:REP 129->253|3dmqA|1e-06|18.6|118/938| RP:PFM:NREP 1 RP:PFM:REP 3->65|PF05103|2e-04|51.7|60/127|DivIVA| HM:PFM:NREP 3 HM:PFM:REP 3->65|PF05103|1.7e-15|43.3|60/131|DivIVA| HM:PFM:REP 117->162|PF05103|7.6e-06|32.6|46/131|DivIVA| HM:PFM:REP 156->224|PF06188|0.00026|28.8|66/191|HrpE| OP:NHOMO 68 OP:NHOMOORG 65 OP:PATTERN -------------------------------------------------------------------- ----111111111111211-111111111111111122111111-1--11-11111-1--11111111111-111--------------------------------------------------------------------------------------------------------------------1--------------------------11----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 113 STR:RPRED 40.2 SQ:SECSTR ################################################################################################################################TTcccccccEEcccccccccccHHHHTTcccccccccccGGGTTTTHHHHHHHHHHHHHccHHHHHHHHHHHHHH#######HHHHHHHHHHHHHHHHTTcccccTHHHHHHHHHHHHHH################################# DISOP:02AL 76-90, 130-141, 249-274, 278-281| PSIPRED ccccHHHHcccHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHccccc //