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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56628.1
DDBJ      :             putative ribosylglycohydrolase
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  72/915 : Eukaryota  12/199 : Viruses  0/175   --->[See Alignment]
a.209.1
:311 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   37->176 2wocA PDBj 4e-11 33.8 %
:RPS:PDB   3->283 2cwcA PDBj 6e-25 23.8 %
:RPS:SCOP  1->305 1t5jA  a.209.1.1 * 4e-29 16.8 %
:HMM:SCOP  1->302 1t5jA_ a.209.1.1 * 1.5e-58 35.6 %
:RPS:PFM   40->278 PF03747 * ADP_ribosyl_GH 8e-11 30.2 %
:HMM:PFM   10->278 PF03747 * ADP_ribosyl_GH 4.3e-62 39.0 259/289  
:BLT:SWISS 37->176 DRAG_RHORU 1e-10 33.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56628.1 GT:GENE BAD56628.1 GT:PRODUCT putative ribosylglycohydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1942659..1943594) GB:FROM 1942659 GB:TO 1943594 GB:DIRECTION - GB:PRODUCT putative ribosylglycohydrolase GB:PROTEIN_ID BAD56628.1 LENGTH 311 SQ:AASEQ MNEFEDRIAGVLLGTAAGDALGAGYEFTHPGPDRPIEMIGGGLGNFAPGEWTDDTSMALAIALAADTDPPGLDLDVVAANFVRWYDSQPPDIGVQTAKVLSVRPESAEAMWRQSMAIEGRTGGNGSLMRTAPVALVHLDSAADCARVAGQVSMLTHRDPQAEQACRIWSLAIRHAVHAGDFQGVRAAVATLDTADTWHRLLDEAETLSPQHFPNNGWVVHALQTAWWAITHAPATGPEHLPAALELCVRAGGDTDTTAAIAGGLLGARWGASAVPAEWRAMLHGYPGLTGEDLVDLALRITRADRRQPTNG GT:EXON 1|1-311:0| BL:SWS:NREP 1 BL:SWS:REP 37->176|DRAG_RHORU|1e-10|33.8|133/294| SEG 9->24|agvllgtaagdalgag| SEG 249->271|raggdtdttaaiaggllgarwga| BL:PDB:NREP 1 BL:PDB:REP 37->176|2wocA|4e-11|33.8|133/291| RP:PDB:NREP 1 RP:PDB:REP 3->283|2cwcA|6e-25|23.8|261/284| RP:PFM:NREP 1 RP:PFM:REP 40->278|PF03747|8e-11|30.2|232/281|ADP_ribosyl_GH| HM:PFM:NREP 1 HM:PFM:REP 10->278|PF03747|4.3e-62|39.0|259/289|ADP_ribosyl_GH| RP:SCP:NREP 1 RP:SCP:REP 1->305|1t5jA|4e-29|16.8|285/301|a.209.1.1| HM:SCP:REP 1->302|1t5jA_|1.5e-58|35.6|278/301|a.209.1.1|1/1|ADP-ribosylglycohydrolase| OP:NHOMO 91 OP:NHOMOORG 88 OP:PATTERN -----------------------------111------------1----------------------- ---------------------1---1------211111-1----1-1--------------------111-----------11-----------------------------------------------111-------1---2-1--1----------------1111-------------------------------------------------------------11--------------------------------------------------------------------------------1--------------1111111-1--------------1---1--1-----------------------------------2--1-------------1-1----------------------------------------------------------------------------------1-----------------------------------------------1--1-------------------------1------------11111--11----1-1------------------------------1-------------------------1---------------------------------------------------------------------------1------------------------------------1----------------------------------11---111---1-------------------------------111------1-------------------------------------------------------- -------------------1-1---------------111111--------------1-----------------------------------1------------------------------------------------------------------------------------------------------11- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 274 STR:RPRED 88.1 SQ:SECSTR ##HHHHHHHHHHHHHHHHHHHHHTTTTccTTccccccccccTTTTccTTcccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHTcccHTcccHHHHHHHHHHHccccccccccccTTccccGGGGGHHHHHHHHTTcGTTHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHTTccHHHHHHTGGGTcccHHHHHHHTTGGGcccccc##cccHHHHHHHHHHHHHH#####cccHHHHHHHHHTTcccHHHHHHHHHHHHHHHHcGGGccHHHHHHcT############################ DISOP:02AL 1-2, 302-311| PSIPRED ccHHHHHHHHHHHHHHHHHHcccccccccccccccHHcccccccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccccccHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccc //