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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56630.1
DDBJ      :             putative transporter ATPase
Swiss-Prot:             

Homologs  Archaea  46/68 : Bacteria  715/915 : Eukaryota  195/199 : Viruses  0/175   --->[See Alignment]
a.23.2c.108.1f.33.1
:806 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   75->548 3b8cA PDBj 2e-25 24.8 %
:RPS:PDB   104->593 3b8cA PDBj 9e-66 24.2 %
:RPS:SCOP  241->318 1dioG  a.23.2.1 * 6e-11 5.1 %
:RPS:SCOP  446->586 1iwoA2  c.108.1.7 * 4e-27 34.0 %
:HMM:SCOP  12->794 1su4A4 f.33.1.1 * 3e-59 25.4 %
:RPS:PFM   75->291 PF00122 * E1-E2_ATPase 3e-13 29.4 %
:RPS:PFM   438->548 PF00702 * Hydrolase 6e-08 36.1 %
:RPS:PFM   632->761 PF00689 * Cation_ATPase_C 5e-04 24.0 %
:HMM:PFM   74->292 PF00122 * E1-E2_ATPase 3.4e-50 33.8 219/228  
:HMM:PFM   297->549 PF00702 * Hydrolase 8.1e-19 26.7 176/192  
:HMM:PFM   666->787 PF00689 * Cation_ATPase_C 5.8e-08 21.5 121/183  
:HMM:PFM   530->575 PF08282 * Hydrolase_3 2e-07 39.1 46/254  
:BLT:SWISS 4->802 CTPE_MYCTU 0.0 62.7 %
:PROS 303->309|PS00154|ATPASE_E1_E2
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56630.1 GT:GENE BAD56630.1 GT:PRODUCT putative transporter ATPase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1944682..1947102 GB:FROM 1944682 GB:TO 1947102 GB:DIRECTION + GB:PRODUCT putative transporter ATPase GB:PROTEIN_ID BAD56630.1 LENGTH 806 SQ:AASEQ MTTTEQLSGSAGLSAAQVEQRRRDGLTNDVPDRASRSVRDIVRANVFTRINAILGVLFLLVLSTGSLIDGMFGLLIVANSAVGIIQEVRAKRTLDQLAIVSQAKPTVRRDGVATQISPKDVVLDDLIELGPGDQIVVDGVVEESELLEVDESLLTGEADPIGKPVGAQVMSGSYVVSGSGCYRATKVGRDAYAARLAEEASKFTLVHSELRSGIDRILKFITVLLVPAGLLSIYNQLFSSGESWRPAVTGMVAALVPMVPEGLVLMTSIAFAVGVVRLGRRKCLVQELPAIEGLARVDVVCADKTGTLTENGMRLAEVRALDDEDEAQVRAALAAMAADDPRPNASVQAIAEALPDAPGWTHTAVAPFSSAKKWSGLSFGEHGDWLLGAPDVLLDRESEHARAAEELGAQGLRVLLLARSDRPVDAPDAPGVVRPAALVVLEQKVRPDARDTLDYFARQDVAIKVISGDNAVSVGAVASSLALPGGEHAVDARTLPDDRDELADVLERETTFGRVRPDQKRAMVGALQSRGHTVAMTGDGVNDVLALKDSDIGVAMGSGSPATRAVAQIVLLDNKFATLPYVVGEGRRVIGNIERVSNLFLTKTVYSVLLAFLVGLAGVGSQVFGYEPIGYPFLPRHVTIAAWFTIGIPAFILSLAPNNERARTGFVSRVMRQAIPSGVVIGAATFVAYLIAYAGPQASEQQKVQAGTTALITLIMIAVWVLAIVARPYVWWKVVLIAVSVLAYVVLFTVPFTREFFALDPSNLALTGAAFACGAVGIVLVEIAWWFGAAEDGRRRLIPASPGGSA GT:EXON 1|1-806:0| BL:SWS:NREP 1 BL:SWS:REP 4->802|CTPE_MYCTU|0.0|62.7|791/797| PROS 303->309|PS00154|ATPASE_E1_E2|PDOC00139| TM:NTM 8 TM:REGION 57->79| TM:REGION 252->274| TM:REGION 603->625| TM:REGION 636->657| TM:REGION 675->696| TM:REGION 706->728| TM:REGION 732->754| TM:REGION 766->788| SEG 136->154|vvdgvveesellevdesll| SEG 169->180|vmsgsyvvsgsg| SEG 327->338|aqvraalaamaa| SEG 471->480|avsvgavass| SEG 608->620|vllaflvglagvg| BL:PDB:NREP 1 BL:PDB:REP 75->548|3b8cA|2e-25|24.8|468/833| RP:PDB:NREP 1 RP:PDB:REP 104->593|3b8cA|9e-66|24.2|479/833| RP:PFM:NREP 3 RP:PFM:REP 75->291|PF00122|3e-13|29.4|211/236|E1-E2_ATPase| RP:PFM:REP 438->548|PF00702|6e-08|36.1|97/195|Hydrolase| RP:PFM:REP 632->761|PF00689|5e-04|24.0|129/180|Cation_ATPase_C| HM:PFM:NREP 4 HM:PFM:REP 74->292|PF00122|3.4e-50|33.8|219/228|E1-E2_ATPase| HM:PFM:REP 297->549|PF00702|8.1e-19|26.7|176/192|Hydrolase| HM:PFM:REP 666->787|PF00689|5.8e-08|21.5|121/183|Cation_ATPase_C| HM:PFM:REP 530->575|PF08282|2e-07|39.1|46/254|Hydrolase_3| GO:PFM:NREP 10 GO:PFM GO:0005524|"GO:ATP binding"|PF00122|IPR008250| GO:PFM GO:0006754|"GO:ATP biosynthetic process"|PF00122|IPR008250| GO:PFM GO:0016020|"GO:membrane"|PF00122|IPR008250| GO:PFM GO:0016820|"GO:hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances"|PF00122|IPR008250| GO:PFM GO:0003824|"GO:catalytic activity"|PF00702|IPR005834| GO:PFM GO:0008152|"GO:metabolic process"|PF00702|IPR005834| GO:PFM GO:0006754|"GO:ATP biosynthetic process"|PF00689|IPR006068| GO:PFM GO:0006812|"GO:cation transport"|PF00689|IPR006068| GO:PFM GO:0015662|"GO:ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism"|PF00689|IPR006068| GO:PFM GO:0016020|"GO:membrane"|PF00689|IPR006068| RP:SCP:NREP 2 RP:SCP:REP 241->318|1dioG|6e-11|5.1|78/137|a.23.2.1| RP:SCP:REP 446->586|1iwoA2|4e-27|34.0|141/168|c.108.1.7| HM:SCP:REP 12->794|1su4A4|3e-59|25.4|386/0|f.33.1.1|1/1|Calcium ATPase, transmembrane domain M| OP:NHOMO 4842 OP:NHOMOORG 956 OP:PATTERN 112---1-111111--31----1-611--11-213212222215523655677--1--1-11211--- 3-1311-433421142166-6D--B3666666E68A5776124323143113519232--32331-7253233332333-3-32234534311212---423-1222211---------------3224231211233332111363C784574433------4632F7631-1--11-----16222212333444444743445554543323446462222444444434111111111111111131138953784375A662276342433667222311263344444444444333333333233344444444433232866676976663844545393212412344332322112335322123-7226-----342276155454222221122223-133-67-5323-1--21-32-1355511-5-332231-122222222521-2322------------------------------1313-21--1322222-222211232222132441123--761432A8283731224332134-------28431532433145132443-323324255232146731----1-11-----------2--248B115222112-41111121212121--1311---3427------33232422222221322-2322222213222222221565221-13342444444334323322222221-433333333334--121111-3464613211--1---1111--1-32333321114333454524535444211---------41111-----1111142--1-----------1243------------2-444432-2231211111-32111111--2---1---3-3 2222788-E672BAG89BAEEEBFEFF889878BBCAA8AAAA899A9BEHHJJEDDA9899635455-4534554724645655665-5E7975E5454588IKM-B8A6OVHTQOEA99DFDVfBXC**U3bIm7CBAIACLD5DC96I85SEJ8EG6GiL7493T78P7I454E95*76889FKThATB38DMCEA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 747 STR:RPRED 92.7 SQ:SECSTR #####TccTTTcccHHHHHHHHHHHccccccccccccccTTTTTTTTcTTHHHHHHHHHHTTTTTTcccccccGGGTTTHHHHHHHHHHHHHHHHHHHTTcccccccccccccccccTTTTcTTcccccccccccccccccccccccccccccTTccccccccccccccccccccccccccccccccTTTTTcTTcccccccccccccHcccccccccTTTTTTHHHHHHHHHHHHHHHHccccTTHHHHHHHHTTTTccccTTTHHHHTTTHHHHHHTTTccccccGGGHHHHTTccccEEEcccccccccccccccccccTTHHHHHHHHHHHccccccccHHHHHTTccTTcccccccccccccccTTTcccccccccccccccccGGGTcTTTTTHHHHHHHHTTTTcEEEEEcccccccccccccccccccEEEEEcccccHHHHHHHHHHHHTTcccEEEEcccHHHHTHHHHTTTcTTcccTTcccccGGGGTTcccHHHTcccEEcccHHHHHHHHHHHHHTTccccccccccTTHHHHHHccccccccccHHHHGGGcccccccccHHHHTHHHHTHHHHHHHHHHHHHHHHHHHHEEEEE##HHHHHHHHHHHTccccTcccccHHHHTTTTTTTcHHHHHHHHHcccccccccHHHHHTTTccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccTHHHHTTTTTcccccHHHHHHHHHHHHHHHHHHcc#################################################### DISOP:02AL 199-211, 801-806| PSIPRED ccccccccccccccHHHHHHHHHHcccccccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccEEEEEEHHHcccccEEEEccccEEEccEEEEEccccEEcHHHHccccccccccccccEEEcEEEEcEEEEEEEEEEccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccEEEcHHHHHHHHcccEEEEcccEEEccccEEEEEEEEcccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccccccccccccccEEEEEEccEEEEEEcHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccccccccccccEEEEEEEEEcccccccHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHcccccccccccHHHccccHHHHHHHccccEEEEEccHHHHHHHHHHHHHcccEEEEEccccccHHHHHHccccEEEHHHHHHHHHHccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccccc //