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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56644.1
DDBJ      :             putative two-component system sensor kinase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  431/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
a.24.8d.122.1
:396 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   286->388 1i5aB PDBj 2e-06 35.0 %
:RPS:PDB   169->388 2bu8A PDBj 3e-07 8.9 %
:RPS:SCOP  169->366 1ya7O1  a.24.8.1 * 4e-29 10.0 %
:HMM:SCOP  238->389 1b3qA3 d.122.1.3 * 1.7e-17 27.5 %
:RPS:PFM   186->267 PF06580 * His_kinase 7e-22 51.2 %
:RPS:PFM   283->388 PF02518 * HATPase_c 9e-07 37.1 %
:HMM:PFM   186->266 PF06580 * His_kinase 8.7e-27 46.9 81/82  
:HMM:PFM   282->389 PF02518 * HATPase_c 3.5e-13 27.7 101/111  
:BLT:SWISS 162->388 YEHU_SHIFL 1e-35 35.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56644.1 GT:GENE BAD56644.1 GT:PRODUCT putative two-component system sensor kinase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1959910..1961100) GB:FROM 1959910 GB:TO 1961100 GB:DIRECTION - GB:PRODUCT putative two-component system sensor kinase GB:PROTEIN_ID BAD56644.1 LENGTH 396 SQ:AASEQ MTAGAVAVAVLAALAAALLVWLRTRRVVTTPAERAVHSALHTASLAAVPLRRGLTEDSAQEAAPHLRALTGASALGVADAEGAVLAWDGTHGDLAGEFTEVARRAIAEQRPVLVSNPSPAEHGARTLVAQPLIIENNGVVGALGVVTGGRPGPGMLGALAEVARYACGQLELAELDASRARLDRAEVRALRAQISPHFIYNALNTIASFVRTDPGRARELILEFADFTRYSFRAAGEYTVLSDELRNIERYLALERARFGDALQVRLRIAPEVLGVVLPFLALQPLVENAVRHGIAGRPGGGVITIEASDAGTDCLISVEDDGAGMDPELLRSGALDAVADGPAGAGESAHVGLANVDDRLRAAFGNDYGLVVETAPGAGTKVSLRVPKFRAGVRA GT:EXON 1|1-396:0| BL:SWS:NREP 1 BL:SWS:REP 162->388|YEHU_SHIFL|1e-35|35.7|210/561| TM:NTM 1 TM:REGION 2->23| SEG 5->20|avavavlaalaaallv| SEG 138->149|gvvgalgvvtgg| BL:PDB:NREP 1 BL:PDB:REP 286->388|1i5aB|2e-06|35.0|100/177| RP:PDB:NREP 1 RP:PDB:REP 169->388|2bu8A|3e-07|8.9|213/359| RP:PFM:NREP 2 RP:PFM:REP 186->267|PF06580|7e-22|51.2|82/82|His_kinase| RP:PFM:REP 283->388|PF02518|9e-07|37.1|97/112|HATPase_c| HM:PFM:NREP 2 HM:PFM:REP 186->266|PF06580|8.7e-27|46.9|81/82|His_kinase| HM:PFM:REP 282->389|PF02518|3.5e-13|27.7|101/111|HATPase_c| GO:PFM:NREP 4 GO:PFM GO:0000155|"GO:two-component sensor activity"|PF06580|IPR010559| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF06580|IPR010559| GO:PFM GO:0016021|"GO:integral to membrane"|PF06580|IPR010559| GO:PFM GO:0005524|"GO:ATP binding"|PF02518|IPR003594| RP:SCP:NREP 1 RP:SCP:REP 169->366|1ya7O1|4e-29|10.0|180/218|a.24.8.1| HM:SCP:REP 238->389|1b3qA3|1.7e-17|27.5|149/185|d.122.1.3|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 984 OP:NHOMOORG 435 OP:PATTERN -------------------------------------------------------------------- 159-1----------------1---1------11111111-----1------111--1--111-2221111-------1112----114473-6-----228133O2J66----------------------------------1-------------------------------------------1---111121211211121117A4423211-3322221111119*122222222222222122112----------1111----1--1---3334233211222122222222333333333333111---111-674-D1111111212C2224343J31--1142168121-2-233-3B-2182-------------------2--------------------------------------11-----------------------------2------------------------------22221----1-------1111---------1---2121--1111122221122211111114-----------112------11-11111--1-11-2--1-211---1-------------------1------3211153222-122221111221121-113----1-1------2233-222223222322-2222223222232222222222221-1111111111111111122221121--211111111111---1----------11-1---------------11111-1-2--11111----1----1111----------1113222222222233423231221111----11----------------------------------------11-11-1----7- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------B--1-----2---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 228 STR:RPRED 57.6 SQ:SECSTR ########################################################################################################################################################################HHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccccccccccccTTcEEEEEHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEcccTTcccEEEEcHHHHHHHHHHHHHHHHHHHHHTTTTcccEEEcccEEEEEEEEEEEcccHHHHGGGGcTTTTccccccccccccHHHHHHHHHHHTTcETGcEEEEEETTEEEEEEEEEEccTTHEEE DISOP:02AL 175-183, 338-351, 394-396| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccEEEEEcccccEEEEEEccccccccccHHHHHHHHcccEEEEccccccccHHHEEEEEEEEEcccEEEEEEEHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEEccEEEEEEEEccccccHHHHHHHcccccccccccccccccHHHHHHHHHHHHHccccEEEEEEEEcccEEEEEEEEEcccccccc //