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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56663.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  22/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:147 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   33->98 2a61A PDBj 1e-05 37.9 %
:RPS:PDB   4->102 3bj6A PDBj 1e-08 16.7 %
:RPS:SCOP  6->102 2ethA1  a.4.5.28 * 1e-10 25.5 %
:HMM:SCOP  4->144 2fbkA1 a.4.5.28 * 1.1e-22 33.3 %
:HMM:PFM   53->92 PF01047 * MarR 1.4e-08 27.5 40/59  
:BLT:SWISS 9->101 HOSA_ECO11 3e-06 35.7 %
:PROS 67->101|PS01117|HTH_MARR_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56663.1 GT:GENE BAD56663.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1984151..1984594 GB:FROM 1984151 GB:TO 1984594 GB:DIRECTION + GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD56663.1 LENGTH 147 SQ:AASEQ MSTETATTLLKLLVHATRSYEHTLEQALRPALDERLRPAHFAVFRYLDPEGSRITALAEAAGMTQQSMGELVTHLAACGYVERRVDPADRRARLVVATPAGRSALRRARREIEAIERALAARLGESTVAGLRAALAGVADVLGEGAR GT:EXON 1|1-147:0| BL:SWS:NREP 1 BL:SWS:REP 9->101|HOSA_ECO11|3e-06|35.7|84/135| PROS 67->101|PS01117|HTH_MARR_1|PDOC00861| SEG 104->123|alrrarreieaieralaarl| SEG 128->146|vaglraalagvadvlgega| BL:PDB:NREP 1 BL:PDB:REP 33->98|2a61A|1e-05|37.9|66/142| RP:PDB:NREP 1 RP:PDB:REP 4->102|3bj6A|1e-08|16.7|96/149| HM:PFM:NREP 1 HM:PFM:REP 53->92|PF01047|1.4e-08|27.5|40/59|MarR| RP:SCP:NREP 1 RP:SCP:REP 6->102|2ethA1|1e-10|25.5|94/140|a.4.5.28| HM:SCP:REP 4->144|2fbkA1|1.1e-22|33.3|138/0|a.4.5.28|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 22 OP:NHOMOORG 22 OP:PATTERN -------------------------------------------------------------------- ----1----------------1----------11111--------1--------------------111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1---------------------------------------11------------------------------------------------------------------1-------------------------------------------11--1111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 102 STR:RPRED 69.4 SQ:SECSTR ccTHHHHHHHHTHHHHHHHHHHHHHHHHHHTHHHTccHHHHHHHHHHHHcTTEEHHHHHHHHTcHHHHHHHHHHHHHTTcEEEEcccccTTccEEEEcHHHH############################################# DISOP:02AL 1-5, 144-147| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHccccccHHHHHHHHcccHHHHHHHHHHHHHcccEEcccccccccEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccc //