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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56667.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  81/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.129.3
:155 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->150 1z94B PDBj 2e-19 37.8 %
:RPS:PDB   9->151 3cnwB PDBj 3e-11 12.8 %
:RPS:SCOP  5->150 1z94A1  d.129.3.5 * 3e-26 35.8 %
:HMM:SCOP  1->152 1z94A1 d.129.3.5 * 2.7e-25 33.6 %
:RPS:PFM   12->148 PF08327 * AHSA1 4e-10 40.5 %
:HMM:PFM   11->150 PF08327 * AHSA1 1.5e-23 34.7 121/123  
:BLT:SWISS 21->155 SYV_WOLSU 2e-04 24.4 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56667.1 GT:GENE BAD56667.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1993697..1994164 GB:FROM 1993697 GB:TO 1994164 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56667.1 LENGTH 155 SQ:AASEQ MTATRIGKHIDAPRETVYRLLLDGEAVARWMVPDGMTSRVHEFDAREGGAFHITLTYDDPTDTGKTTDHTDSYRGRFLMLVPHEQVVQLVEFDTEDPDVQGEMTISYTLTEADGGTDLIALHDKLPSGLDPHDNEIGWRISLAKLAALAERGTLD GT:EXON 1|1-155:0| BL:SWS:NREP 1 BL:SWS:REP 21->155|SYV_WOLSU|2e-04|24.4|131/894| BL:PDB:NREP 1 BL:PDB:REP 5->150|1z94B|2e-19|37.8|135/141| RP:PDB:NREP 1 RP:PDB:REP 9->151|3cnwB|3e-11|12.8|125/137| RP:PFM:NREP 1 RP:PFM:REP 12->148|PF08327|4e-10|40.5|121/124|AHSA1| HM:PFM:NREP 1 HM:PFM:REP 11->150|PF08327|1.5e-23|34.7|121/123|AHSA1| GO:PFM:NREP 1 GO:PFM GO:0006950|"GO:response to stress"|PF08327|IPR013538| RP:SCP:NREP 1 RP:SCP:REP 5->150|1z94A1|3e-26|35.8|134/140|d.129.3.5| HM:SCP:REP 1->152|1z94A1|2.7e-25|33.6|143/0|d.129.3.5|1/1|Bet v1-like| OP:NHOMO 87 OP:NHOMOORG 82 OP:PATTERN --------------------------------------------1----------------------- ----1----------------------------1111-11----------------------1-1----------------------------------------21--1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--11----------------1---------11--1--111-2221----1-----1------------------------------------------------------1-----1111111-----111-1-11--111---------111111-211-1-11--11------------11----------------------------1------------------------------11-----------------111-----------------------------------------------------------------------------------------------------------------------1-----------------1111111------------------------------------------------11111----------------------------------------------------------------1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 152 STR:RPRED 98.1 SQ:SECSTR ccEEEEEEEEcccHHHHHHHHccTTcHHHHcTTGGccEEcccEEEEGGGTEEEEccTTcccEEEEETccEEEEEEEEEEETTTTEEEEEEEEEccccEEEEEEEEEEEEcccTTcEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHTcc### DISOP:02AL 154-155| PSIPRED cccEEEEEEEcccHHHHHHHHccHHHHHHHcccccccEEEEEEEccccccEEEEEEcccccccccccccEEEEEEEEEEEEcccEEEEEEEcccccccccccEEEEEEEEEEccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHcccc //