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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56669.1
DDBJ      :             putative ABC transporter ATP-binding protein
Swiss-Prot:             

Homologs  Archaea  49/68 : Bacteria  735/915 : Eukaryota  16/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:266 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   19->241 2qi9C PDBj 6e-12 30.6 %
:RPS:PDB   11->49 2d3wA PDBj 2e-07 43.6 %
:RPS:PDB   21->219 3b5jA PDBj 6e-25 19.7 %
:RPS:SCOP  19->241 1l7vC  c.37.1.12 * 5e-25 29.1 %
:HMM:SCOP  16->220 1ii8.1 c.37.1.12 * 2.1e-61 41.9 %
:HMM:PFM   50->175 PF00005 * ABC_tran 4.4e-22 33.9 115/118  
:HMM:PFM   39->58 PF03205 * MobB 0.00013 55.0 20/137  
:BLT:SWISS 11->260 HMUV_PSEE4 1e-31 40.4 %
:PROS 147->161|PS00211|ABC_TRANSPORTER_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56669.1 GT:GENE BAD56669.1 GT:PRODUCT putative ABC transporter ATP-binding protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1995198..1995998) GB:FROM 1995198 GB:TO 1995998 GB:DIRECTION - GB:PRODUCT putative ABC transporter ATP-binding protein GB:PROTEIN_ID BAD56669.1 LENGTH 266 SQ:AASEQ MTRDTAPGGRLSVTEVSCEVGRRPVLTGVSFEVAPGEMIGVVGPNGSGKTTLLHVLAGVRRPRRGRVTVDGQPLHELPARQRARTVALVAQDERPPADLLVGEVVALGRTPYLPPWGAGSPAERQVVTNALAAVDLAGLAARPVHKLSGGERRRVLLARALAQDTPVLILDEPTNHLDITHQLDLLALARGLGRTVVTALHDLTLADRYCDRVLVLHGGTAHPPADPAVALTPEVLADVFGIRAVRVPHPDTGAPHLLITPREAKA GT:EXON 1|1-266:0| BL:SWS:NREP 1 BL:SWS:REP 11->260|HMUV_PSEE4|1e-31|40.4|245/255| PROS 147->161|PS00211|ABC_TRANSPORTER_1|PDOC00185| SEG 58->71|gvrrprrgrvtvdg| SEG 130->141|alaavdlaglaa| SEG 152->162|rrrvllarala| SEG 185->194|llalarglgr| BL:PDB:NREP 1 BL:PDB:REP 19->241|2qi9C|6e-12|30.6|209/240| RP:PDB:NREP 2 RP:PDB:REP 11->49|2d3wA|2e-07|43.6|39/244| RP:PDB:REP 21->219|3b5jA|6e-25|19.7|198/243| HM:PFM:NREP 2 HM:PFM:REP 50->175|PF00005|4.4e-22|33.9|115/118|ABC_tran| HM:PFM:REP 39->58|PF03205|0.00013|55.0|20/137|MobB| RP:SCP:NREP 1 RP:SCP:REP 19->241|1l7vC|5e-25|29.1|213/231|c.37.1.12| HM:SCP:REP 16->220|1ii8.1|2.1e-61|41.9|203/370|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 3147 OP:NHOMOORG 800 OP:PATTERN --1----11---11--3-11-222555323531--331212122465C54C8112323242111---- -3-2695599895725622-22113922222342225D9A17573767758276336511442AC968CK7-222----2521----1212212222--1-21121133---------------21413311122336644113535335221531211111-53447621121111111-114332232-374777776674767676585575676437A5465444556622222221222222234422511-23-2-1-6612352--11--1133322221222222222222322222222222223111111111238347777787485332225443631-A21-5CA222222253223-413113112322323-644248695756656656554A-55344658592-JDD9BCAEFGDD9722336G96AB431111111111111-167-------------------------------1111221124558664888777448788577383434--4411241182525722313--5211222221-224116522332333113-12212334411114646-123-22222----------221--11364241211221344321332241333422--11121------G677187799A7AAC76-8786B9A6A78CA667665CBD9A4454444444444444443966967783-588888887888--2------312111A7A444353--11-1--41122111-255134234535546331787---------24556555556594522--------1-1---2-11------------5-1-1--------------------2221221122222-33 ------1------1------111---------------------------------------------------------------11------------1---------------------------------------------------------2----1-----------1---------1123--1------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-6, 8-10, 264-266| PSIPRED cccccccccEEEEEEEEEEEccEEEEEcccEEEcccEEEEEEccccccHHHHHHHHHccccccccEEEEccEEcccccHHHHHHHcccccccccccccccHHHHHHccccccHHHccccHHHHHHHHHHHHHHccHHHHHcccHHHccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHHccEEEEEcccHHHHcHHHHHHHHccEEEEEEcccccEEEEEEEcccccc //