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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56671.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  3/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:388 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   133->255 2cutA PDBj 3e-05 14.4 %
:RPS:SCOP  106->251 1jmkC  c.69.1.22 * 4e-05 7.9 %
:HMM:SCOP  80->367 1k8qA_ c.69.1.6 * 2e-12 25.0 %
:RPS:PFM   153->200 PF10230 * DUF2305 5e-04 38.3 %
:HMM:PFM   119->209 PF00975 * Thioesterase 1.9e-07 21.1 90/229  
:PROS 153->162|PS00120|LIPASE_SER
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56671.1 GT:GENE BAD56671.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1997250..1998416 GB:FROM 1997250 GB:TO 1998416 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56671.1 LENGTH 388 SQ:AASEQ MSLWDERHPSTVADWDDERRRARLRETRLGHRWTRLRRTRLALVRVAALLTLLLTLFVQYWVHDVAPERARLARTEPALLPVATPVDDRNWDTAVVDMVGLGGLNATDTAAALPALRRLGVVWAIRYDNQGIDSKVIADLVVRAAQMSGVRNIVLVGHSMGGVIALEVGEHIHRGSDRRLAGVLLDCTPMDLGAVRPESRGRGEDMLRWMGWLPGARESRTLRMAVETYARRDRFLDPAGRPVPGIRLAALGAVLTEVTTEKVLSHNAASNGLIESQFLAIVGGGAIDNLRALARPAEGKPRPAIVFIRPRDAARDRVVDVEYSHRVLVERVGGVDGSLLVVLPREIGHANPRQAPVAYNTVIEQQVLPFVQRYLDRARGVRTAAAPS GT:EXON 1|1-388:0| PROS 153->162|PS00120|LIPASE_SER|PDOC00110| TM:NTM 1 TM:REGION 40->62| SEG 18->32|errrarlretrlghr| SEG 34->56|trlrrtrlalvrvaalltllltl| SEG 311->321|rdaardrvvdv| SEG 332->343|vggvdgsllvvl| RP:PDB:NREP 1 RP:PDB:REP 133->255|2cutA|3e-05|14.4|118/198| RP:PFM:NREP 1 RP:PFM:REP 153->200|PF10230|5e-04|38.3|47/259|DUF2305| HM:PFM:NREP 1 HM:PFM:REP 119->209|PF00975|1.9e-07|21.1|90/229|Thioesterase| RP:SCP:NREP 1 RP:SCP:REP 106->251|1jmkC|4e-05|7.9|139/222|c.69.1.22| HM:SCP:REP 80->367|1k8qA_|2e-12|25.0|236/0|c.69.1.6|1/1|alpha/beta-Hydrolases| OP:NHOMO 3 OP:NHOMOORG 3 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1-11----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 175 STR:RPRED 45.1 SQ:SECSTR ################################################################################HHHHHHTTcccccEEEEEETTTEEEEEccccTTccccEEEEEEccTTccHHHHHHHHHHHHHHHHHHcTTcEEEEEEETHHHHHHHHHHHHccHHHHHTEEEEEEEccTTTTTTTTccTTccGGGEEEEccTTcGGGTGGGcGTcccccGGGGccHHHHHTHHHHHHHHHHHHHH##################################################################################################################################### DISOP:02AL 1-7, 199-200, 384-388| PSIPRED ccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHcccccEEEEEcccccccccHHHHHHHHcccccccHHHHHHHHHHHccEEEEEEEccccccHHHHHHHHHHHHHHccccEEEEEEcccccEEEEEccHHHHcccccEEEEEEEEccccccccccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHEEEEcccHHHHHHHHHcccccccccEEEEEEccccccccEEEEcHHHHHHHHHHccccccEEEEEEHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccc //