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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56701.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  49/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:167 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   9->152 2a61A PDBj 2e-09 17.9 %
:RPS:SCOP  19->146 2fbkA1  a.4.5.28 * 7e-13 28.1 %
:HMM:SCOP  4->148 2fbkA1 a.4.5.28 * 2.8e-20 28.7 %
:HMM:PFM   37->88 PF01047 * MarR 2.8e-08 32.0 50/59  
:BLT:SWISS 19->146 MPRA_ECOLI 2e-07 26.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56701.1 GT:GENE BAD56701.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2026540..2027043) GB:FROM 2026540 GB:TO 2027043 GB:DIRECTION - GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD56701.1 LENGTH 167 SQ:AASEQ MTKWLDPVEHQAWRAIVALMTRLPSALDTRLQRESGITHFEYWVMTLLSEEPGHRLQMSELAHKANSSLSRLSHVVSKLERLGWAERSVTAGKRGVQAVLTDRGYLKVVEAAPGYLTAVRRLVFDGLDERQKAELAALTQAMSDRLGAELSRPDGEPGRLDAPGDPA GT:EXON 1|1-167:0| BL:SWS:NREP 1 BL:SWS:REP 19->146|MPRA_ECOLI|2e-07|26.8|127/176| RP:PDB:NREP 1 RP:PDB:REP 9->152|2a61A|2e-09|17.9|140/142| HM:PFM:NREP 1 HM:PFM:REP 37->88|PF01047|2.8e-08|32.0|50/59|MarR| RP:SCP:NREP 1 RP:SCP:REP 19->146|2fbkA1|7e-13|28.1|121/156|a.4.5.28| HM:SCP:REP 4->148|2fbkA1|2.8e-20|28.7|143/0|a.4.5.28|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 109 OP:NHOMOORG 49 OP:PATTERN -------------------------------------------------------------------- ----4112222111-------1---3------1212533412154211211-111211--11429234471--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 151 STR:RPRED 90.4 SQ:SECSTR #cccHHHHcHHHHHHHHHHHHHHHHHHHTTHHHHHTccHHHHHHHHHHHHHccccccHHHHHHHHTccHHHHHHHHHHHHHTTcEEEEETTEEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHTTc############### DISOP:02AL 145-167| PSIPRED ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccHHHHHHHHccccHHHHHHHHHHHHcccEEccccccccEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccc //