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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56703.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  38/68 : Bacteria  701/915 : Eukaryota  101/199 : Viruses  0/175   --->[See Alignment]
c.47.1
:153 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->127 2cx3B PDBj 1e-15 38.1 %
:RPS:PDB   1->150 3drnB PDBj 3e-27 29.7 %
:RPS:SCOP  1->150 1xvwA1  c.47.1.10 * 2e-24 24.5 %
:HMM:SCOP  2->151 1x0rA1 c.47.1.10 * 6.9e-44 40.1 %
:RPS:PFM   4->124 PF00578 * AhpC-TSA 3e-21 45.7 %
:HMM:PFM   4->127 PF00578 * AhpC-TSA 2.8e-33 39.2 120/124  
:BLT:SWISS 4->150 PRXQ_GENTR 8e-25 40.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56703.1 GT:GENE BAD56703.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2027817..2028278) GB:FROM 2027817 GB:TO 2028278 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56703.1 LENGTH 153 SQ:AASEQ MQTGSLAPNFALPDQTGTTRTLDELLGAGPLVLFFYPAANTPICTAEACHFRDVSAEFAALGASCAGISTDSVDTQAGFATGRRLDYPLLSDADGAVAARFGVKRGLLGRIAPVKRRTFVIDTDRTVLTVISSELKADTHADEALAFLRARVK GT:EXON 1|1-153:0| BL:SWS:NREP 1 BL:SWS:REP 4->150|PRXQ_GENTR|8e-25|40.3|144/217| BL:PDB:NREP 1 BL:PDB:REP 1->127|2cx3B|1e-15|38.1|126/159| RP:PDB:NREP 1 RP:PDB:REP 1->150|3drnB|3e-27|29.7|145/150| RP:PFM:NREP 1 RP:PFM:REP 4->124|PF00578|3e-21|45.7|116/122|AhpC-TSA| HM:PFM:NREP 1 HM:PFM:REP 4->127|PF00578|2.8e-33|39.2|120/124|AhpC-TSA| GO:PFM:NREP 2 GO:PFM GO:0016209|"GO:antioxidant activity"|PF00578|IPR000866| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00578|IPR000866| RP:SCP:NREP 1 RP:SCP:REP 1->150|1xvwA1|2e-24|24.5|147/153|c.47.1.10| HM:SCP:REP 2->151|1x0rA1|6.9e-44|40.1|147/0|c.47.1.10|1/1|Thioredoxin-like| OP:NHOMO 1274 OP:NHOMOORG 840 OP:PATTERN 44--1-333333333311222---42243121------------11-2-11-1----1---312--22 5132211111111122233-321132333333333333331324112112213332131122213333332-111111---13211121111-1111--1-222172112--------------12222212223111121---3-63444435544334333333444433224333234233341111-1111111111111111111111111111111112------1211111111111111111111-------------------------------------------------------------------------11-------1-1-1---1111-1-1-111-----------111-2--1-111121111121111111112111111111-111-1111211121112221223112222111121-1111111111111111322-1111111111111-41111-1111-11-1111-1112-1222222222221111223322222222321111-11111111112122112342311111111111223212---1-1-21221-1-21112113-1436-1111111111111111111111111111112121112112111111211111122122--111111-----11111121111111111-1111111111111111111111111111111111111111111111111111-11111111111111-21111111111111111111111111111111111121111111111111-112111111----1---111111111111111111111111111111-1-112222-------------------1--------1-------211221-1113-- ----B6--------11222211111111211111111111111-1112222121212121221-1-1--1--1--11111-----111-21222121112-1111--1-2----------------------------------------------------1--1---1---1-32116121-3423423422----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 153 STR:RPRED 100.0 SQ:SECSTR ccTTccccccEEEETTccEEEGGGTTTTcEEEEEEcccTTcHHHHHHHHHHHHTHHHHGGGcEEEEEEEcccHHHHHHHHHHHTcccEEEEcTTcHHHHHTTccETTTEcccccccEEEEEcTTccEEEEEEccccTTHHHHHHHHHHHHHHH PSIPRED cccccccccEEEEcccccEEEHHHHccccEEEEEEEccccccccHHHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHccccEEEEEccccHHHHHccccccccccccccEEEEEEEccccEEEEEEEccccccccHHHHHHHHHHHcc //