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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56705.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  4/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:240 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   40->222 PF09534 * Trp_oprn_chp 6e-11 35.1 %
:HMM:PFM   30->222 PF09534 * Trp_oprn_chp 3.4e-65 55.1 185/189  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56705.1 GT:GENE BAD56705.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2029904..2030626 GB:FROM 2029904 GB:TO 2030626 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56705.1 LENGTH 240 SQ:AASEQ MTAPDPDRAPAEGGSRALRARRSGRPIAPVVLLAVAAALMWGASRLTWVRVTSADGLTEPRTDDLVGATWFGALTPLALVLLAAVAAVLATRGWLRRVVGVLVALVAAVTAVPAFALLTGSGATAERAGALAELPGRATVTEVQTSIFPAVVTMTAALCAFAAGLLLARMPRESAGLSGRYDNPGARRAAAAEEVAKQRNQEGGALSERVLWDALDAGEDPTEDDHRTGDDRLDTDRKAP GT:EXON 1|1-240:0| TM:NTM 4 TM:REGION 23->45| TM:REGION 67->89| TM:REGION 99->121| TM:REGION 146->168| SEG 13->25|ggsralrarrsgr| SEG 30->39|vvllavaaal| SEG 77->90|lalvllaavaavla| SEG 98->118|vvgvlvalvaavtavpafall| SEG 156->168|aalcafaagllla| SEG 186->196|arraaaaeeva| RP:PFM:NREP 1 RP:PFM:REP 40->222|PF09534|6e-11|35.1|174/187|Trp_oprn_chp| HM:PFM:NREP 1 HM:PFM:REP 30->222|PF09534|3.4e-65|55.1|185/189|Trp_oprn_chp| OP:NHOMO 4 OP:NHOMOORG 4 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-22, 171-203, 226-240| PSIPRED cccccccccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccEEEEEEcccccccccHHEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHccccccccccEEEEEEEEEEEcHHHHHHHHHHHHHHHHHHHccccHHHHHHcccccHHHHHHHHHHHHHHHcccccccccccHHHHHHHcccccccccccccccccccccccc //