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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56712.1
DDBJ      :             putative acyl-CoA thioesterase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  314/915 : Eukaryota  109/199 : Viruses  0/175   --->[See Alignment]
d.38.1
:302 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   38->297 1c8uA PDBj 9e-51 42.6 %
:RPS:PDB   51->296 3cjyA PDBj 2e-28 21.2 %
:RPS:SCOP  38->124 1tbuA1  d.38.1.3 * 5e-09 35.4 %
:RPS:SCOP  131->297 1c8uA2  d.38.1.3 * 5e-50 40.0 %
:HMM:SCOP  18->130 1c8uA1 d.38.1.3 * 5.6e-34 46.0 %
:HMM:SCOP  131->301 1c8uA2 d.38.1.3 * 1.9e-46 43.7 %
:RPS:PFM   192->293 PF02551 * Acyl_CoA_thio 3e-25 52.0 %
:HMM:PFM   78->117 PF02551 * Acyl_CoA_thio 0.00014 27.5 40/132  
:HMM:PFM   168->294 PF02551 * Acyl_CoA_thio 1.1e-41 36.3 124/132  
:BLT:SWISS 38->297 TESB_ECOLI 3e-50 42.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56712.1 GT:GENE BAD56712.1 GT:PRODUCT putative acyl-CoA thioesterase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2037442..2038350 GB:FROM 2037442 GB:TO 2038350 GB:DIRECTION + GB:PRODUCT putative acyl-CoA thioesterase GB:PROTEIN_ID BAD56712.1 LENGTH 302 SQ:AASEQ MSISLSDSVGAEQAPAERSDLDVLLGLLELDEVEPDVFIGHHPEKVWSRTFGGQLVAQAIMAAGRTVGDRPVHAVNAHFVRGGDPKKPIEYRVVRHRDGRAFANRTVTAVQDDQELFVMLAAFQDWGKGLEHAHALPEVPDPETLPRVEESFQGLEDKLEMFVKAPRPIDMRYTNDPAWILKGTGERLNHNRVWMRADGALPDDPLVHVATLGYSSDTTVLDSILTTHGLSWGLDRIVAATVNHSIWFHRPFRFDDWALYATESPVAAGSRGLATGRFYSRTGDLLATTVQEGLIRHFPSRR GT:EXON 1|1-302:0| BL:SWS:NREP 1 BL:SWS:REP 38->297|TESB_ECOLI|3e-50|42.6|256/286| SEG 20->37|dldvllglleldevepdv| BL:PDB:NREP 1 BL:PDB:REP 38->297|1c8uA|9e-51|42.6|256/285| RP:PDB:NREP 1 RP:PDB:REP 51->296|3cjyA|2e-28|21.2|217/249| RP:PFM:NREP 1 RP:PFM:REP 192->293|PF02551|3e-25|52.0|100/119|Acyl_CoA_thio| HM:PFM:NREP 2 HM:PFM:REP 78->117|PF02551|0.00014|27.5|40/132|Acyl_CoA_thio| HM:PFM:REP 168->294|PF02551|1.1e-41|36.3|124/132|Acyl_CoA_thio| GO:PFM:NREP 2 GO:PFM GO:0006637|"GO:acyl-CoA metabolic process"|PF02551|IPR003703| GO:PFM GO:0016291|"GO:acyl-CoA thioesterase activity"|PF02551|IPR003703| RP:SCP:NREP 2 RP:SCP:REP 38->124|1tbuA1|5e-09|35.4|82/96|d.38.1.3| RP:SCP:REP 131->297|1c8uA2|5e-50|40.0|165/171|d.38.1.3| HM:SCP:REP 18->130|1c8uA1|5.6e-34|46.0|113/0|d.38.1.3|1/1|Thioesterase/thiol ester dehydrase-isomerase| HM:SCP:REP 131->301|1c8uA2|1.9e-46|43.7|167/0|d.38.1.3|1/1|Thioesterase/thiol ester dehydrase-isomerase| OP:NHOMO 543 OP:NHOMOORG 423 OP:PATTERN -------------------------------------------------------------------- ---111111111-125422-26113522222276663635-3-311111111211111--112111222211111111-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--1112-----1111111111111111111111-1-11111111111-11111111111111-11---------1----------------------------------------------1131---------------------------1-------------------11-11----------------------1----------------1--------1------------------------------11-111111111111111111111111111-------------11111111111111111-111111111111111111111111111111111111111111111111111--111111111111--------------1111---111-1111---111111111111-11111111111111111----------1111111111111111112111111111----------------------------------------------------------- ------------11--1-1-2111112------111-1-1111---1-11111------1111-----1----1111-11-11--1----211111-1---11323--4--12111-111111121121362-221-11111111-111-111111111---112------5714----------1131-23------2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 261 STR:RPRED 86.4 SQ:SECSTR #####################################EEEcccccccccccHHHHHHHHHHHHHHHTcTccEEEEEEEEcccccTTcEEEEEEEEEEEccccEEEEEEEEETTEEEEEEEEEEccTTccccccccccccccGGGcccccHHHHHccccccTTccTGGGEEEEEcccTcccccTTTccTTEEEEEEEETTcccccHHHHHHHHHHHTTHHHHHHHHHTccccTTcTTEEcEEcEEEEEEcccccTcccEEEEEEEEEETTTEEEEEEEEEcTTccEEEEEEEEEEccEE#### DISOP:02AL 1-21, 178-189, 300-302| PSIPRED cccccccccccccccccHHHHHHHHHHHccEEEccccEEcccccccccccHHHHHHHHHHHHHHHHcccccEEEEEEEEEccccccccEEEEEEEEEcccEEEEEEEEEEEccEEEEEEEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccEEEEEEccccccccccccccccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEEEEEccccccccEEEEEEEccEEcccEEEEEEEEEcccccEEEEEEEEEEEEcccccc //