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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56716.1
DDBJ      :             putative two-component system response regulator
Swiss-Prot:             

Homologs  Archaea  29/68 : Bacteria  803/915 : Eukaryota  34/199 : Viruses  0/175   --->[See Alignment]
c.23.1
:204 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   16->201 1sd5A PDBj 2e-83 80.6 %
:RPS:PDB   17->143 3cz5B PDBj 2e-20 28.3 %
:RPS:SCOP  17->128 1a0oA  c.23.1.1 * 2e-23 31.2 %
:HMM:SCOP  16->198 1qo0D_ c.23.1.3 * 1.8e-56 43.3 %
:RPS:PFM   18->127 PF00072 * Response_reg 9e-14 39.4 %
:RPS:PFM   151->198 PF03861 * ANTAR 3e-08 52.1 %
:HMM:PFM   18->127 PF00072 * Response_reg 2.3e-31 38.2 110/112  
:HMM:PFM   143->198 PF03861 * ANTAR 2e-23 41.1 56/56  
:BLT:SWISS 16->201 PDTAR_MYCTU 5e-83 80.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56716.1 GT:GENE BAD56716.1 GT:PRODUCT putative two-component system response regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2040643..2041257 GB:FROM 2040643 GB:TO 2041257 GB:DIRECTION + GB:PRODUCT putative two-component system response regulator GB:PROTEIN_ID BAD56716.1 LENGTH 204 SQ:AASEQ MSTTAGGAGTTNAGAKRVVVAEDEALIRMDLVEMLTEEGYQVVGEAGDGQQAVDLAVEHRPDLVIMDVKMPRRDGIDAAAEIASKRVAPVVILTAFSQRDLVERARDAGAMAYLVKPFTKSDLVPAIELAASRFHEITALESEVANLADRLETRKLVERAKGVLMQTQGLSEPQAFKWIQRTAMDRRTTMKAVAEVVLENLAPK GT:EXON 1|1-204:0| BL:SWS:NREP 1 BL:SWS:REP 16->201|PDTAR_MYCTU|5e-83|80.6|186/205| SEG 3->15|ttaggagttnaga| BL:PDB:NREP 1 BL:PDB:REP 16->201|1sd5A|2e-83|80.6|186/188| RP:PDB:NREP 1 RP:PDB:REP 17->143|3cz5B|2e-20|28.3|127/140| RP:PFM:NREP 2 RP:PFM:REP 18->127|PF00072|9e-14|39.4|109/111|Response_reg| RP:PFM:REP 151->198|PF03861|3e-08|52.1|48/56|ANTAR| HM:PFM:NREP 2 HM:PFM:REP 18->127|PF00072|2.3e-31|38.2|110/112|Response_reg| HM:PFM:REP 143->198|PF03861|2e-23|41.1|56/56|ANTAR| GO:PFM:NREP 3 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| RP:SCP:NREP 1 RP:SCP:REP 17->128|1a0oA|2e-23|31.2|112/128|c.23.1.1| HM:SCP:REP 16->198|1qo0D_|1.8e-56|43.3|178/0|c.23.1.3|1/1|CheY-like| OP:NHOMO 7214 OP:NHOMOORG 866 OP:PATTERN -----------------------82222-213--83--22233G8-1L19537-2-2122-------- 7NU4U44433343545544-4622464444449888BJ99B99KDFA58C949872451189F9RBIUYW6454488725957-112477A8-611---139166I5K86----------11111---44-12-6-OPQVR878VAYFGKCB69935222222AC8HQRT72223222223226B622333A9JLLLLKINMDOLMLLKKNJJDHKORCHGI9BA777878j*66666664666666645554522233211-222223332133111179855456336666877676745555555555556444444444FSAHZBBBAAAB8CAIDBB5574KAF22E8BEBONPLHDB9CEB6AE235IA4CCCA3322389DCC3459A87922222222224-5575665A56518BBEAAB78ABC6ABA644796899A64444444433333HB8-------------------------111--5465123424DDDFFB8665599HJ777849BEI8CBF1167BLE968K6II767999AAFB422222124639EQ4WLJ36TI4iLEEI1VKZUMUZGGHHKIQLGJA211111111----------5D338--HE6DDD96C57598A99AABAAABB8EBFD--55C6F------56667869879988989-8A98999899899899887888572548887888778788878588777695-555566655766--1511111222258L6A1111-1-1111-11265656375669CKLLMKLHNHILKICIGL-----1---C888C89899998BBHFIFJFFCDE443411O17867773332322241--------------------------43433434341R2 ------1-------22311-----------------------------1----21111----111--1----1--------11---------3-2--11-----------------------------------------------------------1--------------2--11------14--21-11-6---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 186 STR:RPRED 91.2 SQ:SECSTR ###############EEEEEEcccHHHHHHHHHHHHTcTEEEEEEEccHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHcTTccEEEEEccccHHHHHHHHHHTccEEEETTccTTHHHHHHHHHHTTccEEcHHHHHEEEccccTTHHHHHHHccHHHHHHHcccHHHHHHHHHHHHHHHTccHHHHHHHHHHHH### DISOP:02AL 1-16, 135-154| PSIPRED ccccccccccccccccEEEEEcccHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHcccccEEEEEccccHHHHHHHHHccccEEEEccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHccc //