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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56719.1
DDBJ      :             putative branched-chain amino acid transporter component
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  414/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
:466 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   61->334 PF02653 * BPD_transp_2 1e-15 34.9 %
:HMM:PFM   60->355 PF02653 * BPD_transp_2 6.4e-48 31.8 255/267  
:BLT:SWISS 66->334 BRAE_PSEAE 1e-36 45.3 %
:BLT:SWISS 383->440 BRAE_PSEAE 1e-04 32.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56719.1 GT:GENE BAD56719.1 GT:PRODUCT putative branched-chain amino acid transporter component GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2043804..2045204 GB:FROM 2043804 GB:TO 2045204 GB:DIRECTION + GB:PRODUCT putative branched-chain amino acid transporter component GB:PROTEIN_ID BAD56719.1 LENGTH 466 SQ:AASEQ MSTTTTPARAGLGDALRTWWDGLSRPAQWAVGVPAIIALALLPLFPPPVLDTPAYNFGLVMAEFAMFALIAIGLNVVVGQAGLLDLGYVGFYAIGAYTVGLLTSPNSPWNQTDGGWLDPQWAWLACLPIAVAVTALSGLILGSPTLRLRGDYLAIVTLGFGEIVRLLADNLHELTNGSLGLSEVAYPHVGESESKPNGVFSAGNTGDPASANLLDRASYGTYWYWLGLALVIVVLLIVGNLERSRVGRAWVAIREDEDAAEIMGVPTFKFKLWAFLIGAAVGGLSGAMYAGQVQFINPTGFNIINSMLFLCAVVIGGQGNKLGVIFGAFIIAYLPKRLTSVNLVDSESTGYVLLIVDVVLFVGLLVLWRYKGRDLGAWVRRGVIAGMVFTGVMAALLLGSVLLFRPGGAQSLGDLKYLYFGIALVVMMILRPQGLFPVRQKLLSYGRQVYQAVRRPTVGEPIGAGK GT:EXON 1|1-466:0| BL:SWS:NREP 2 BL:SWS:REP 66->334|BRAE_PSEAE|1e-36|45.3|247/417| BL:SWS:REP 383->440|BRAE_PSEAE|1e-04|32.8|55/417| TM:NTM 10 TM:REGION 27->49| TM:REGION 57->79| TM:REGION 83->104| TM:REGION 122->144| TM:REGION 226->243| TM:REGION 262->284| TM:REGION 308->330| TM:REGION 348->369| TM:REGION 382->404| TM:REGION 418->439| SEG 30->54|avgvpaiialallplfpppvldtpa| SEG 226->241|lglalvivvllivgnl| SEG 352->367|vllivdvvlfvgllvl| RP:PFM:NREP 1 RP:PFM:REP 61->334|PF02653|1e-15|34.9|238/271|BPD_transp_2| HM:PFM:NREP 1 HM:PFM:REP 60->355|PF02653|6.4e-48|31.8|255/267|BPD_transp_2| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF02653|IPR001851| GO:PFM GO:0006810|"GO:transport"|PF02653|IPR001851| GO:PFM GO:0016020|"GO:membrane"|PF02653|IPR001851| OP:NHOMO 824 OP:NHOMOORG 425 OP:PATTERN ----------------1---1--24---5-11--------------------------------1--- ---11---------1------2---2------122211--211111---111111--111113-1-1111-11112111---1------------1-------------------------------------2--23332111212-13-----11-----12-1--21-------------54311-1--------------------1--------3211--------32------------------------11---------------1-------1---11111111111111-------------1111111111111-311111-1-1---11----2----4---2--1311-11----1-11-1------111--17772125456422132233122-1241-42914--52232555322266---2151122213--------2---1412-----------------------------1-----299274344442222255423333234463433-211231122634367244----11----------1651761--6234233522121131-1--1112151--1-11111-----------11----1111221---1------1-----1--1-1-------1------2122-2-1111111111-11111111111111111113332211-111111111111111141111111--1111111-1111--------------1223---------------------1---2122222432222221322--------------------1-------------------1---------------1---------------------------212--12111-1- -------------------------------------------------------------------------------------------------------------------------------------------------------------------2---------------------1--2---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-4, 8-10, 385-389, 453-466| PSIPRED ccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHcccccccccccccccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccccccccccccccccEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccccccc //