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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56720.1
DDBJ      :             putative branched-chain amino acid transporter ATP-binding protein
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  903/915 : Eukaryota  195/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:653 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   65->312 1g6hA PDBj 5e-40 34.6 %
:BLT:PDB   417->652 1ji0A PDBj 1e-59 54.0 %
:RPS:PDB   60->645 3cmvG PDBj 8e-52 12.8 %
:RPS:SCOP  65->312 1b0uA  c.37.1.12 * 1e-50 28.6 %
:RPS:SCOP  417->653 1ji0A  c.37.1.12 * 5e-46 51.9 %
:HMM:SCOP  62->317 1g6hA_ c.37.1.12 * 2.8e-65 34.6 %
:HMM:SCOP  412->653 1ji0A_ c.37.1.12 * 2.9e-59 34.6 %
:RPS:PFM   105->242 PF00005 * ABC_tran 6e-12 36.4 %
:RPS:PFM   457->580 PF00005 * ABC_tran 9e-07 27.8 %
:HMM:PFM   105->241 PF00005 * ABC_tran 1.7e-22 31.0 116/118  
:HMM:PFM   457->580 PF00005 * ABC_tran 2.3e-17 36.0 114/118  
:HMM:PFM   290->312 PF12399 * BCA_ABC_TP_C 2e-13 65.2 23/23  
:HMM:PFM   634->651 PF12399 * BCA_ABC_TP_C 0.00054 44.4 18/23  
:HMM:PFM   440->464 PF02367 * UPF0079 0.00083 44.0 25/123  
:BLT:SWISS 61->312 LIVG_SALTY 1e-67 49.6 %
:BLT:SWISS 417->651 LIVF_SALTY 1e-59 50.9 %
:PROS 489->530|PS00041|HTH_ARAC_FAMILY_1
:PROS 214->228|PS00211|ABC_TRANSPORTER_1
:PROS 553->567|PS00211|ABC_TRANSPORTER_1
:REPEAT 2|65->313|417->652
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56720.1 GT:GENE BAD56720.1 GT:PRODUCT putative branched-chain amino acid transporter ATP-binding protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2045201..2047162 GB:FROM 2045201 GB:TO 2047162 GB:DIRECTION + GB:PRODUCT putative branched-chain amino acid transporter ATP-binding protein GB:PROTEIN_ID BAD56720.1 LENGTH 653 SQ:AASEQ MTGPGAGDALFDKEDIAAGYAAPPEAESAGEVDVTAVAPELADADAVAEVVAPHRTIETAVGEPLLRTDGLTVKFGGLTALDDVSFEIRRGEILGLIGPNGAGKTTCFNAITGVYRPAAGLVYFDGKPLTKTKRNAITRLGIARTFQNVRLFGEMTALENVVVGTDARHKTSVPGAVFRTPRHRREERDAIERGMALLEFVGIAPRAVEKARNLSYGDQRRLEIARALATEPKLLCLDEPAAGFNPSEKSALMDLIRKIRDDGFTVLLIEHDMRLVMGVTDRIVVLEFGRKIADGLPAEIRDDPAVIAAYLGVPDDQVGAEQATDAGRDGVEPGGERAGAEPAAGQAGAEPEGGQAGGEYPTQKLPIPKPGAGPAVRVGEPARPETGPATTDPADAHRPGTGAAPDLSTRTPDAPALLEVEDMVVNYGRIQALHGVSLRVAEGELVTLLGANGAGKTTTMRALSGLLPLTRGRIRFEGRDITTVKAHDRVVGGLIQAPEGRGVFPGMTVQENLDMGCYGRVFKQKAEYTRTLEWVFELFPRLRERRKQVGGTLSGGEQQMLAIGRALMARPRLLLLDEPSMGLAPMVIQQIFRIISEINQQGTTVLLVEQNAQQALARSDRAYILETGAVTKTGSGADLLTDPAVKSAYLGVG GT:EXON 1|1-653:0| BL:SWS:NREP 2 BL:SWS:REP 61->312|LIVG_SALTY|1e-67|49.6|252/255| BL:SWS:REP 417->651|LIVF_SALTY|1e-59|50.9|232/237| PROS 489->530|PS00041|HTH_ARAC_FAMILY_1|PDOC00040| PROS 214->228|PS00211|ABC_TRANSPORTER_1|PDOC00185| PROS 553->567|PS00211|ABC_TRANSPORTER_1|PDOC00185| NREPEAT 1 REPEAT 2|65->313|417->652| SEG 36->53|avapeladadavaevvap| SEG 332->359|epggeragaepaagqagaepeggqagge| SEG 565->576|ralmarprllll| BL:PDB:NREP 2 BL:PDB:REP 65->312|1g6hA|5e-40|34.6|246/254| BL:PDB:REP 417->652|1ji0A|1e-59|54.0|226/231| RP:PDB:NREP 1 RP:PDB:REP 60->645|3cmvG|8e-52|12.8|525/1167| RP:PFM:NREP 2 RP:PFM:REP 105->242|PF00005|6e-12|36.4|121/123|ABC_tran| RP:PFM:REP 457->580|PF00005|9e-07|27.8|120/123|ABC_tran| HM:PFM:NREP 5 HM:PFM:REP 105->241|PF00005|1.7e-22|31.0|116/118|ABC_tran| HM:PFM:REP 457->580|PF00005|2.3e-17|36.0|114/118|ABC_tran| HM:PFM:REP 290->312|PF12399|2e-13|65.2|23/23|BCA_ABC_TP_C| HM:PFM:REP 634->651|PF12399|0.00054|44.4|18/23|BCA_ABC_TP_C| HM:PFM:REP 440->464|PF02367|0.00083|44.0|25/123|UPF0079| GO:PFM:NREP 4 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 2 RP:SCP:REP 65->312|1b0uA|1e-50|28.6|234/258|c.37.1.12| RP:SCP:REP 417->653|1ji0A|5e-46|51.9|235/240|c.37.1.12| HM:SCP:REP 62->317|1g6hA_|2.8e-65|34.6|254/254|c.37.1.12|1/2|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 412->653|1ji0A_|2.9e-59|34.6|240/0|c.37.1.12|2/2|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 47632 OP:NHOMOORG 1166 OP:PATTERN UTMAOMJHRSSQRNXKqIQOLPQY*OTjnUhaGBFDFAIGIFBWZOXlMQ**h9SbOTWORGICa1AA UXsP*dYgnnoQbTYTUNM-MhCCW*OOOOOLwoqp****W*d*t*xktliO***MReEEz**i*w****hbYYYzbYYP*gqB8A9BONNI6KFJH--FFMJKLcJaPS89888899C98888FUQJRYPLRSWPput**LKL*ewgqubYnfkVXOMOKMHigdn***XISGIFEFTFKGGpdeYXphAYgw************************frx**jrqtvsqr**UdefffcYddddddcYXUUWwYaX**VNTUayxMM**bVRXjfdjjkimrpktxtsnplmjjqrjnnbaaaabbbdbbac*qqhgisqtnl*v*********f*eq***WacX*lhmi*bmUN**pkdagkRdialhPZZdNhVWWNLLKINgZ***cUw****************-sw*nj*s***WA**************JML**********TSTTTTTT*bfLWle*77544444542367895688586696574LCCEDD************************v********9P****q*ms******cokPWJOnYHHFFFEFRSRatkY**UbYwoXowgevKfccUTYkVacabcr*Z*GHHNDGFFHFD787987877EPFFGNMnnwMzYXJTKxRSUVTLRfQQQRURaVUba5-DLUQN2-----*y**X*yz*****z*ww-*yyx*x*z*z***vwywvt*****egcmlijjllllljjljjj*pjmrrrvQ2************34IIFIFFGPPRPOO*o*WVWWVWHLMKKSMRZKMOMMGSINTtbyyyv****t****n***FDCACDDBDLbnm*rrrsrv*vzwQPPNONNLNNEDCD53OQNNGHJJ78777879*CWB8B56-89AAEBAHGG9AE7B9667bkoXVl*nrkEhN --11WVF-OD5BJXMC9B89DHBEAIEDC7868GFF7AA8988557A9DEDCMCAED6697866836213515762413424546422-BE69BB5774584ANJF4LWMXLNHTPOGBA7FOIgg6c6y*U3WKbHFB6XBDTQAHB7ASB8*BPJJoBR*EfEO9gQQ*XYNDEBB7*A89DDlNR*8keD8wdujE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2, 36-62, 397-410| PSIPRED ccccccHHHccccccHHHccccccccccccccccccccHHHcccccccccccccccccccccccEEEEEcEEEEEccEEEEEcccEEEcccEEEEEEccccccHHHHHHHHHccccccccEEEEccEEcccccHHHHHHcccEEccccccccccccHHHHHHHHHHHcccccHHHHHHHccccHHHHHHHHHHHHHHHHHcccHHHHHcccccccHHHHHHHHHHHHHHccccEEEEccccccccHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHccEEEEEEccEEEEEccHHHHHccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccHHHccccccccccccccccccccHHHHHHHHHHcccccccccEEEEEcEEEEEccEEEEEcccEEEcccEEEEEEccccccHHHHHHHHHccccccccEEEEccEEcccccHHHHHHHccEEccccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccHHHHHHcccccccHHHHHHHHHHHHHHccccEEEEccccccccHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHccEEEEEEccEEEEEccHHHHHccHHHHHHHcccc //