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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56722.1
DDBJ      :             putative amidase
Swiss-Prot:             

Homologs  Archaea  34/68 : Bacteria  624/915 : Eukaryota  123/199 : Viruses  0/175   --->[See Alignment]
c.117.1
:496 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   21->293 3h0lA PDBj 9e-14 33.0 %
:RPS:PDB   5->491 2dqnA PDBj 4e-63 20.0 %
:RPS:SCOP  5->491 2df4A1  c.117.1.1 * 5e-64 19.8 %
:HMM:SCOP  1->484 1mt5A_ c.117.1.1 * 2.1e-112 41.5 %
:RPS:PFM   28->469 PF01425 * Amidase 2e-28 34.2 %
:HMM:PFM   27->473 PF01425 * Amidase 2.9e-90 34.9 421/435  
:BLT:SWISS 10->490 NYLA_PSES8 5e-51 35.3 %
:PROS 148->179|PS00571|AMIDASES
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56722.1 GT:GENE BAD56722.1 GT:PRODUCT putative amidase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2050045..2051535) GB:FROM 2050045 GB:TO 2051535 GB:DIRECTION - GB:PRODUCT putative amidase GB:PROTEIN_ID BAD56722.1 LENGTH 496 SQ:AASEQ MRFDEYRAHDAVGLAELVARGEVRAADLLEVALARCAEVDPVLNVLTRLMAGEARERVGGALDGPLAGVPFLVKDLMQDYAGLPTSGGTGPLRTVPAVEHSIVVRRWLAAGLVIFGKTTTPEYGCKAVTESRTFGITRNPWDLTRTPGGSSGGSAAAVAAGVVPVAGANDGGGSIRIPAACTGLFGLKPGRGLVPNGPLAGDAILGAGVQGVISRSVRDTAVMLDILSPPDPGAPYTVARPETTYRAALDTPPPALRIGFTHRSPLDTPVHPEAVRAVTETARLLESLGHTVESAEPAIDGVRLARDFMTVWTTHLAASVADTCERTGAKPTDFDVDTQTMAAVGRTVPAPALVTAGDRWNEYTRALADFHGRYDLLLTPTLAEPPQPIGTNRLPAALETILPPILRAGAGHLISRSSMYRGMVTSHLAATPFTQLANVTGRPAMSVPLHTTADGLPLGVHFTGPSGSEALLLRLAAQLEAAAPWFDRHPPADPAR GT:EXON 1|1-496:0| BL:SWS:NREP 1 BL:SWS:REP 10->490|NYLA_PSES8|5e-51|35.3|464/493| PROS 148->179|PS00571|AMIDASES|PDOC00494| SEG 148->173|ggssggsaaavaagvvpvagandggg| SEG 470->483|alllrlaaqleaaa| BL:PDB:NREP 1 BL:PDB:REP 21->293|3h0lA|9e-14|33.0|270/478| RP:PDB:NREP 1 RP:PDB:REP 5->491|2dqnA|4e-63|20.0|454/485| RP:PFM:NREP 1 RP:PFM:REP 28->469|PF01425|2e-28|34.2|409/425|Amidase| HM:PFM:NREP 1 HM:PFM:REP 27->473|PF01425|2.9e-90|34.9|421/435|Amidase| GO:PFM:NREP 1 GO:PFM GO:0016884|"GO:carbon-nitrogen ligase activity, with glutamine as amido-N-donor"|PF01425|IPR000120| RP:SCP:NREP 1 RP:SCP:REP 5->491|2df4A1|5e-64|19.8|454/485|c.117.1.1| HM:SCP:REP 1->484|1mt5A_|2.1e-112|41.5|448/537|c.117.1.1|1/1|Amidase signature (AS) enzymes| OP:NHOMO 1899 OP:NHOMOORG 781 OP:PATTERN 11----2411111111--1111-2111-1113--------------11111111------------11 2462411222321264566-64228D66666745555DD925242231123143322211355225A44321111111-111411111--------1--------1-11-11111111-111111----1-11---3333311115232222322111112111212345311111111111132311111311111111111111111212221111221231111111112-111111111111111111131212212111112222111-121113332222111111111111112322322232232122331222211-21-------1-11-111---1-1--1111122111111111111---51153361----11GGI112C38C222332321214-33631427355-722532324443C5-51233434412322222222322-1--2--------1-11------------------225--79A6665767824444557444453676858B51322-1342241717731111111-111111111113224241112111111111111112144345711--111-------1-------1211122---121-1-1--------1------1------11122------1-31------1-11-----------------------11111-------------------2-------------------------11111333314324---------------1111112-1211434317241234215451111111112----------------12121-------1111--1122---------1--------------------------111--12111211 ----11--------1469268696C7546353454558676685465158539623211222-2----1---1--1-------------4416211111-1-11-----23--1-2--1--11--2-1-272-113----1--1111---1--4-331211--311-1431112-1111B11-135-14511--1-11- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 476 STR:RPRED 96.0 SQ:SECSTR ####TTTTccHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHccEEEEcHHHHHHHHTTcccccccccEEEEETTccccTTccccTTcGGGTTcccccccHHHHHHHHTTcEEEEEEcccGGGcccccTTccccccccTTcTTcccccccHHHHHHHHTTcccEEEEEccccTTHHHHHHHTcEEEEccTTccccTTcccccTTTTccEEEEEccHHHHHHHHHHHccccTTcTTccccccccccTTTTcccTTcEEEEEHGGGGcTTccHHHHHHHHHHHHHHHHTTcEEEEEccGcGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHHHccHHHHHHHHHHHcTTTHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEccccccccTTT###########cccccccTTcTTcHHHHHTEEEEHHHHTTTTTHHHHHHTccEEEEEEEEEETTEEEEEEEEccTTcHHHHHHHHHHHHHHcccTTTGGG##### DISOP:02AL 493-496| PSIPRED ccHHHHHHccHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccEEEEEcHHHHHHHHHccccccccccHHHHHHHHHHHcccccccccHHHccccccccHHHHHHHHHcccEEEEEccHHHHHcccccccccccccccccccccccccccHHHHHHHHccccEEEEcccccccccHHHHHcccEEEccccccccccccccccccccccccEEEccHHHHHHHHHHHHccccccccccccccccHHHHHccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccccccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccHHHHHHccccEEEEccccccccccEEEEEEcccccHHHHHHHHHHHHHHcccccccccccccc //