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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56726.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  34/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.41.1
:260 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   7->99 3bl4B PDBj 1e-14 10.8 %
:RPS:SCOP  11->76 1pm3A  b.41.1.2 * 1e-06 22.6 %
:HMM:SCOP  6->118 1dxrH1 b.41.1.1 * 1.3e-27 30.4 %
:RPS:PFM   139->243 PF09557 * DUF2382 5e-10 44.8 %
:HMM:PFM   136->243 PF09557 * DUF2382 6.6e-31 50.0 108/113  
:HMM:PFM   4->76 PF05239 * PRC 5.1e-15 31.9 72/79  
:BLT:SWISS 12->220 Y1314_DEIRA 6e-14 31.2 %
:REPEAT 2|196->221|228->253

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56726.1 GT:GENE BAD56726.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2054337..2055119) GB:FROM 2054337 GB:TO 2055119 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56726.1 LENGTH 260 SQ:AASEQ MIMTQATLDSLIGSTVIDANGEKIGKVKQIYIDNENGSPTWVAVSTGMFSSDSLVPLAGAQHQRDKEALRVQVSKERVKSAPHLDQDGRISREAETELFSHYGIDPRRAGWDTYGRRHIRPGPDEPMTHGRDDALIRSEERLEVGTERETVGRARLRKYVVEEDQTINVPTRHEEVRVEREPITDPGRVGRTDLGEDEREVTLHADRVTVDKEAVPVERVRLAVDDVEDQQTVSENVRKEYIDTEGVPTEQRRPGPRDQR GT:EXON 1|1-260:0| BL:SWS:NREP 1 BL:SWS:REP 12->220|Y1314_DEIRA|6e-14|31.2|192/274| NREPEAT 1 REPEAT 2|196->221|228->253| RP:PDB:NREP 1 RP:PDB:REP 7->99|3bl4B|1e-14|10.8|93/109| RP:PFM:NREP 1 RP:PFM:REP 139->243|PF09557|5e-10|44.8|105/112|DUF2382| HM:PFM:NREP 2 HM:PFM:REP 136->243|PF09557|6.6e-31|50.0|108/113|DUF2382| HM:PFM:REP 4->76|PF05239|5.1e-15|31.9|72/79|PRC| RP:SCP:NREP 1 RP:SCP:REP 11->76|1pm3A|1e-06|22.6|62/69|b.41.1.2| HM:SCP:REP 6->118|1dxrH1|1.3e-27|30.4|112/222|b.41.1.1|1/1|PRC-barrel domain| OP:NHOMO 43 OP:NHOMOORG 34 OP:PATTERN -------------------------------------------------------------------- ----11-2---11-----------------------1-------3--2----11-21------21121221----------------------------------------------------------------------------1-1----------------1--1-------------1-1-----------------------------------------------1------------------------------------------------------------------------------------------------------1------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111-------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 96 STR:RPRED 36.9 SQ:SECSTR ######EEEccccccccHHHHHHHHHHHHHHTTccccEEEcccHHHHHHHHHHHHcccccccEEEcccGGGHHHHHHHHHHTTccccEEEEccHHHHHHHHH############################################################################################################################################################## DISOP:02AL 127-140, 250-260| PSIPRED cEEccccHHHHccccccccccccccEEEEEEEEccccEEEEEEEEcccccccEEEEcccEEEEEcccEEEEcccHHHHHccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccEEEEcHHHcccccEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEcccccccEEcEEccccEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEcEEEEEEEEEEEEEEEcccccccccccccccc //