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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56737.1
DDBJ      :             putative ABC transporter ATP-binding protein
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  907/915 : Eukaryota  197/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:263 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   14->262 2oukB PDBj 3e-78 59.4 %
:RPS:PDB   15->263 3dmdC PDBj 7e-52 11.0 %
:RPS:SCOP  14->263 1b0uA  c.37.1.12 * 3e-61 50.8 %
:HMM:SCOP  20->241 1ii8.1 c.37.1.12 * 2.1e-71 42.1 %
:RPS:PFM   54->188 PF00005 * ABC_tran 3e-20 48.3 %
:HMM:PFM   54->188 PF00005 * ABC_tran 2e-27 38.5 117/118  
:HMM:PFM   28->62 PF03215 * Rad17 6.9e-05 37.1 35/498  
:BLT:SWISS 14->263 GLNQ_BACST 3e-77 60.8 %
:PROS 160->174|PS00211|ABC_TRANSPORTER_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56737.1 GT:GENE BAD56737.1 GT:PRODUCT putative ABC transporter ATP-binding protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2065715..2066506 GB:FROM 2065715 GB:TO 2066506 GB:DIRECTION + GB:PRODUCT putative ABC transporter ATP-binding protein GB:PROTEIN_ID BAD56737.1 LENGTH 263 SQ:AASEQ MTSTTKGAAAAPPMIRADRVCKNFGALQVLKGVSLEVGRGEVLCMIGPSGSGKSTFLRCINHLEQVNAGRLYVDGELVGYRQKGDKLYELHPREAARQRRDIGMVFQHFNLFPHRTALENIIEAPVQVKKIPKAEAVARGQELLARVGMRDKANAYPAQLSGGQQQRVAIARALAMDPKLMLFDEPTSALDPELVGEVLTVMRELADSGMTMVVVTHEMGFAREVADQLVFMDGGVVVEAGAPREVLAQPKHERTKAFLSRLL GT:EXON 1|1-263:0| BL:SWS:NREP 1 BL:SWS:REP 14->263|GLNQ_BACST|3e-77|60.8|240/242| PROS 160->174|PS00211|ABC_TRANSPORTER_1|PDOC00185| BL:PDB:NREP 1 BL:PDB:REP 14->262|2oukB|3e-78|59.4|239/241| RP:PDB:NREP 1 RP:PDB:REP 15->263|3dmdC|7e-52|11.0|219/318| RP:PFM:NREP 1 RP:PFM:REP 54->188|PF00005|3e-20|48.3|120/123|ABC_tran| HM:PFM:NREP 2 HM:PFM:REP 54->188|PF00005|2e-27|38.5|117/118|ABC_tran| HM:PFM:REP 28->62|PF03215|6.9e-05|37.1|35/498|Rad17| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 1 RP:SCP:REP 14->263|1b0uA|3e-61|50.8|250/258|c.37.1.12| HM:SCP:REP 20->241|1ii8.1|2.1e-71|42.1|214/370|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 54116 OP:NHOMOORG 1172 OP:PATTERN YZMBUOJKYXXVXTaOoLTTRTRa*PTmrZkXKCEDEDIGHGDWbRWqNS**nAVfTXaQVLLHc1BC ZeuP*jjkrrvXkUbUXPO-Om99Z*PPPPPPzppqw***Y*j****i*yoW***UZnEE***t*y****khccc*ifeQ*mtDCEBCRRTL6MHIK--GIULOMgQeST9AAAAAADDDCCCCKWUOVbSOXXcXo****ONM*f*ou*nmphmbcTKRKQMihcu***gIVKMHIJTHLHHsfiZUxpBZg*************************ks***msyz*wvy**Ynoopokllmnnnlldfcbg*fcd**bSgYkxwRS**fYSajkjhktswyrpyzwvtyttrovwqttbcbaZccdddcab*pqhfgpnqqo***********k*lv***Zlkh*tlvv*hpWN**xlcdhnUdnfsmRgaeOecZZOJOOLOga***dYv****************-uz*rm*u***VC**************LOO**********UTUUUUUU*ehJTnd*55455555774577CD77AB7A7787695MGIIGF************************w********DP****t*u*******euuRaOWsdKKLLMLLUSQh*oe**Ujb*ucu*gfuLeccWYeoZefedg**b*PMMQIPPPPKJDEEFDEEEEKXHIKRQxt*T*VkOXQ*TaeebQZhYVVXYYebZdd5-FLdTP2-1111****c************-*************zz*zyz*****ptkssorrtrtttqqtqrq*wsuwwv*X4************34NIGIFGHOPRPSO*u*ccaccaJQSOMVRWhPRSRRITHRV*j*************u***FEDBCEDCEPjts*wxxxx*****XYWRSSRRSRGGGG86QTTTLLKKAA899999*CaEDFEF-EEGFJKEQPMCHNDIGAACck*XVt*wutGhO 1222abM-cL9DQcQMHJHKOQLWLWOJIGIGGPMLEMKKHLLGIGLLORNMdSMNNGFIGJA8A6982873ACB6B288CDC9CF45-JbCHEHNAA9C98CNNL7VlnkQcUhZZOHJEOUKrjC*E**o3vTjKHKBjHNfUDQMFFYEB*HUOOuGe*JmOcF*Zf*XhdMHOKG*FGDRV*qt*H**KL*l*xV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-11| PSIPRED cccccccccccccEEEEEEEEEEEccEEEEccccEEEcccEEEEEEccccccHHHHHHHHHHcccccccEEEEccEEEcccccccccccccHHHHHHHHHcccEEEEcHHHcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccHHHHccccHHcccHHHHHHHHHHHHHccccEEEEccccccccHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHccEEEEEEccEEEEEccHHHHHHccccHHHHHHHHHHc //