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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56739.1
DDBJ      :             putative oxidoreductase
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  160/915 : Eukaryota  60/199 : Viruses  0/175   --->[See Alignment]
a.102.1d.145.1
:447 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->192,417->446 2bvfA PDBj 3e-21 33.5 %
:RPS:PDB   13->446 3e0tA PDBj 2e-34 15.3 %
:RPS:SCOP  27->195 1mbbA1  d.145.1.2 * 1e-22 13.9 %
:RPS:SCOP  337->439 1h12A  a.102.1.2 * 5e-08 11.7 %
:HMM:SCOP  4->195 1w1oA2 d.145.1.1 * 1.5e-45 42.7 %
:RPS:PFM   36->115 PF01565 * FAD_binding_4 2e-05 42.5 %
:HMM:PFM   33->165 PF01565 * FAD_binding_4 1.8e-32 36.8 133/138  
:HMM:PFM   420->445 PF08031 * BBE 1.8e-09 46.2 26/47  
:BLT:SWISS 8->447 MCRA_STRLA 7e-71 44.1 %
:PROS 33->66|PS00862|OX2_COVAL_FAD
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56739.1 GT:GENE BAD56739.1 GT:PRODUCT putative oxidoreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2067478..2068821 GB:FROM 2067478 GB:TO 2068821 GB:DIRECTION + GB:PRODUCT putative oxidoreductase GB:PROTEIN_ID BAD56739.1 LENGTH 447 SQ:AASEQ MHTDTFSGPVLRPGEPEYDAEVAGFQTAYTHRPALVVGARHTEDVRAAVEYAARHGFPVAVQATGHGLSVPAEDGVLITTRRMTGIRIDPARRTARIGAGVRAGALIDAAAEHGLAPLTGSSPSVGVVGYTLGGGLGLLARRYGYAADHVREIELVTADGRVRTLRPGDDLFGAVLGTGGNFGVVTALEVELVPVRTVHGGQLVFDTELVAPALAAWRDWTATVPDALTSSFTMLRYPDIEQVPAAVRGRYVASIRIAFDGPAEAGQRLAGPLRAVGDRLRDDLRDMPYTESHTIHADPDHPHPYAATNALLGEFTGATAAALLDTAGPDGAVAAVLDIRHLGGALAEPGPATPVADRSAPFLVRVITMPEPGAGRVAPEEHGLVRTALAPWTVGHSLAFLYGAGDSADEAQTRAGYRPEVYARLAGLKTAYDPHNMFRFNRNIRPA GT:EXON 1|1-447:0| BL:SWS:NREP 1 BL:SWS:REP 8->447|MCRA_STRLA|7e-71|44.1|433/448| PROS 33->66|PS00862|OX2_COVAL_FAD|PDOC00674| SEG 125->147|vgvvgytlggglgllarrygyaa| SEG 316->332|tgataaalldtagpdga| BL:PDB:NREP 1 BL:PDB:REP 5->192,417->446|2bvfA|3e-21|33.5|218/453| RP:PDB:NREP 1 RP:PDB:REP 13->446|3e0tA|2e-34|15.3|432/475| RP:PFM:NREP 1 RP:PFM:REP 36->115|PF01565|2e-05|42.5|80/139|FAD_binding_4| HM:PFM:NREP 2 HM:PFM:REP 33->165|PF01565|1.8e-32|36.8|133/138|FAD_binding_4| HM:PFM:REP 420->445|PF08031|1.8e-09|46.2|26/47|BBE| GO:PFM:NREP 2 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01565|IPR006094| GO:PFM GO:0050660|"GO:FAD binding"|PF01565|IPR006094| RP:SCP:NREP 2 RP:SCP:REP 27->195|1mbbA1|1e-22|13.9|166/198|d.145.1.2| RP:SCP:REP 337->439|1h12A|5e-08|11.7|103/404|a.102.1.2| HM:SCP:REP 4->195|1w1oA2|1.5e-45|42.7|192/206|d.145.1.1|1/1|FAD-binding domain| OP:NHOMO 366 OP:NHOMOORG 222 OP:PATTERN -----------------------1----1--------------------------------------- --2-4---------11111-12---211111-21112132-122141-1---211------12--164221-----------2--------------------1---1----------------------------111------1-1-1-------------1--1-------------------11-----1-----1------12------1--2---1----------2-----------------------------------------1----------------------------------------------------21111121-------------------------1----1---------1----------1------------------------------121--111111211112--------------1------------------------------------------------1---111--1121--------23--------21222-----1--11-132------------------1-121--------1--------------1---1-1--------------------------------------1--------------1----------1-1-------------1--1111111--111111111-1111111--------------------------------------------------------------11---------------------------------11--1-111211--------------------1---------------------------------------------------------------------------- ----13--------111223-2-4553--1---54612121221111144545323622221---------------------------5121531-----2--1--212-------------------------------------------------------------------------1--11E1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 446 STR:RPRED 99.8 SQ:SECSTR ccccccccEEEHTTcHHHHHHTccccGGGcccccEEEEcccHHHHHHHHHHHHHHTccEEEEcccccTTcTccccEEEEcTTcccEEEcTTccEEEETTccHHHHHHHHHHTTcEEccccccTTccHHHHHHHccccTTHHHHccGGGGEEEEEEEcTTccEEEEEccHHHHHHHTTccccccEEEEEEEccEEccccEEEEEEEEcccHHHHHHHHHHHHHHHHHTccTTcccEEEEEEETTEEEEEEEEcccHHHHHHHHHHHHHHTTccEEEEEEEEEcHHHHHTTcccccccccccccccEEEEEEEEccccHHHHHHHHHHHHHccccEEEEEcccTTcTGGGccTTcccccTTccEEEEEEEEETTTTTccHHHHHHHHHHHHTTccGGGccccGGGccTTccHHHHHHHHHGGGHHHHHHHHHHHcTTcTTccTTcccc# DISOP:02AL 446-447| PSIPRED cccccccccEEccccccHHHHHcccccccccccEEEEEEccHHHHHHHHHHHHHcccEEEEEEccccccccccccEEEEcccccEEEEEccccEEEEEccccHHHHHHHHHHccccccccccccccccccHHccccccccccccHHHHHHEEEEEEccccEEEEEEccccHHHHHHHccccEEEEEEEEEEEEEcccEEEEEEEEcHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccccccccccEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccccccHHHccHHHHHHHHHHHHHHccccccEEEEEEEccccccccccccccccccccEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHccHHHHHHHHHHHHHHccccccccccccccc //