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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56742.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  77/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
c.66.1
:283 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   77->258 3bkwB PDBj 9e-13 34.1 %
:RPS:PDB   77->281 3bkwA PDBj 3e-15 23.1 %
:RPS:SCOP  81->185 2avnA1  c.66.1.41 * 1e-15 27.0 %
:HMM:SCOP  32->282 1wznA1 c.66.1.43 * 2.5e-39 28.8 %
:RPS:PFM   81->191 PF01209 * Ubie_methyltran 1e-08 37.3 %
:HMM:PFM   85->181 PF08241 * Methyltransf_11 1.4e-21 38.3 94/95  
:BLT:SWISS 79->182 UBIG_AZOSE 7e-10 32.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56742.1 GT:GENE BAD56742.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2069980..2070831) GB:FROM 2069980 GB:TO 2070831 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56742.1 LENGTH 283 SQ:AASEQ MSDERHAQANAVLGTTGTARTRLGSAESERASRRWWDADADDYHRTHADFLGVDSPGGEFVWCPEGLHEGDMRLLGPDLTGKRVLEIGCGSAPCARWLAGQGAHAVGLDLSMGMLRRGLAAMARGGPRVPLVQAGAETLPFADASFDAACSAFGAVPFVADSARVMREVARVLRPGGRWVFSVNHPMRWIFPDDPGAAGLTATIPYFDRTPYVEVDAEGTPTYVEHHRTMGDRVREIVAAGLVLEDLIEPDWPEWLDREWGQWSPLRGEIFPGTAIFVTRKPD GT:EXON 1|1-283:0| BL:SWS:NREP 1 BL:SWS:REP 79->182|UBIG_AZOSE|7e-10|32.7|104/234| SEG 13->24|lgttgtartrlg| SEG 33->42|rrwwdadadd| SEG 141->155|fadasfdaacsafga| BL:PDB:NREP 1 BL:PDB:REP 77->258|3bkwB|9e-13|34.1|173/212| RP:PDB:NREP 1 RP:PDB:REP 77->281|3bkwA|3e-15|23.1|199/215| RP:PFM:NREP 1 RP:PFM:REP 81->191|PF01209|1e-08|37.3|110/234|Ubie_methyltran| HM:PFM:NREP 1 HM:PFM:REP 85->181|PF08241|1.4e-21|38.3|94/95|Methyltransf_11| GO:PFM:NREP 1 GO:PFM GO:0008168|"GO:methyltransferase activity"|PF01209|IPR004033| RP:SCP:NREP 1 RP:SCP:REP 81->185|2avnA1|1e-15|27.0|100/246|c.66.1.41| HM:SCP:REP 32->282|1wznA1|2.5e-39|28.8|229/0|c.66.1.43|1/1|S-adenosyl-L-methionine-dependent methyltransferases| OP:NHOMO 89 OP:NHOMOORG 80 OP:PATTERN -------------------------------------------------------------------- ---12111111---1---------------------1111-222111-1-----1-----231-1112121---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-----------------------------1-----1----1111111111-----------1---11-----1-1--------1---------------------------------------------------------------1111---111111--11111-1------------------------------------------------------------------1-11-11---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11---------1--------------1--1------------------------------------------------------------------------------------------------------------ ----------------------------------------------------1------1-1----------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 240 STR:RPRED 84.8 SQ:SECSTR ##########################################GGGcccccHHHcccccccccccHHHHHHHHTTcccccTTcEEEEETcTTcHHHHHHHHTTccEEEEEEccHHHHHcTHHHTcccccEEEEEccGGGccEccTTcEEEEEEEccGGGcccHHHHHHHHHHHEEEEEEEEEEEEcHHHHccccccEEcTTccEEcccccTTccEEEcTTHHcccEEEccHHHHHHHHHHTTcEEEEEEEccccHHccHHHHHcGGGGGGGTccEEEEEEEcc# DISOP:02AL 1-6, 8-11, 15-28| PSIPRED cccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHccccEEEEEccHHHcccccccHHHHHHHHHHHHccccHHHHHHHHHHHHccccEEEEEEcccHHHHccccccHHHHHHHHHHHcccccccHHcccccccEEEEccHHHHHHHHHHcccEEEEEEccccccccHHHHcccccccccccccEEEEEEEccc //