[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56747.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  36/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.175.1
:173 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->173 2p12A PDBj 4e-42 51.2 %
:RPS:SCOP  8->173 2p12A1  b.175.1.1 * 2e-55 50.9 %
:HMM:PFM   53->124 PF04167 * DUF402 7.5e-21 32.9 70/72  
:HMM:PFM   116->166 PF11199 * DUF2891 0.00051 30.6 49/326  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56747.1 GT:GENE BAD56747.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2075098..2075619) GB:FROM 2075098 GB:TO 2075619 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56747.1 LENGTH 173 SQ:AASEQ MTQASVHVHRPKVEHFDVANLTNTDPKGFVRAVERYHVEPWGLYMARSADHPEFHYLESWLLPALALRVTIFHFRPEHRRDQDYYLDLGEFTEVAPQRWQSVDHYLDIVVRSGRAAELLDVDELLAAHAAGLLSAAAAQAAIEHATRAIAGIAAHDYSLEGWLASEGITLTWR GT:EXON 1|1-173:0| SEG 115->150|aaelldvdellaahaagllsaaaaqaaiehatraia| BL:PDB:NREP 1 BL:PDB:REP 8->173|2p12A|4e-42|51.2|162/163| HM:PFM:NREP 2 HM:PFM:REP 53->124|PF04167|7.5e-21|32.9|70/72|DUF402| HM:PFM:REP 116->166|PF11199|0.00051|30.6|49/326|DUF2891| RP:SCP:NREP 1 RP:SCP:REP 8->173|2p12A1|2e-55|50.9|165/165|b.175.1.1| OP:NHOMO 36 OP:NHOMOORG 36 OP:PATTERN -------------------------------------------------------------------- -----11111111-11111-11--1111111111111111------------------------111--------------------------------------------------------------------------------------------------------------------11---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 162 STR:RPRED 93.6 SQ:SECSTR #######cccccEEEEETTTTEEEcTTccEEEccEEEEETTEEE#EEEcccccEEEEEEEEEGGGTEEEEEEEEcTTccccccEEEEEEEEEc#cccEEEEEEEEEEEEEETTT#EEEEEcHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHTTTcHHHHHHHTT#ccccc DISOP:02AL 1-7| PSIPRED cccccEEEEccccEEEEHHHccccccHHHHHHHHHEEccccEEEEEccccccEEEHHHHHHHHHcccEEEEEEccccccccccEEEEHHHccccccccEEEEEEEEEEEEEccccEEEEcHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccEEcc //