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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56756.1
DDBJ      :             putative two-component system response regulator
Swiss-Prot:             

Homologs  Archaea  14/68 : Bacteria  727/915 : Eukaryota  7/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:207 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->205 3c3wB PDBj 5e-69 66.3 %
:RPS:PDB   1->205 3c3wB PDBj 2e-36 78.5 %
:RPS:SCOP  2->190 1s8nA  c.23.1.1 * 7e-19 20.9 %
:RPS:SCOP  161->205 1fseF  a.4.6.2 * 3e-11 33.3 %
:HMM:SCOP  1->181 1s8nA_ c.23.1.1 * 3.9e-28 29.1 %
:RPS:PFM   4->116 PF00072 * Response_reg 4e-07 31.5 %
:RPS:PFM   147->196 PF00196 * GerE 7e-08 52.0 %
:HMM:PFM   4->116 PF00072 * Response_reg 2.7e-23 30.4 112/112  
:HMM:PFM   145->201 PF00196 * GerE 7.1e-19 38.6 57/58  
:HMM:PFM   105->152 PF04912 * Dynamitin 0.00044 33.3 48/387  
:BLT:SWISS 1->203 YFIK_BACSU 5e-33 36.0 %
:PROS 161->188|PS00622|HTH_LUXR_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56756.1 GT:GENE BAD56756.1 GT:PRODUCT putative two-component system response regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2086514..2087137) GB:FROM 2086514 GB:TO 2087137 GB:DIRECTION - GB:PRODUCT putative two-component system response regulator GB:PROTEIN_ID BAD56756.1 LENGTH 207 SQ:AASEQ MLSVFLVDDHEIVRRGLIDLLDSDPDLRVIGEAGDVANAMAGIRATRPDVAVLDVRLPDGNGIELCRDLLAELDGLHCLILTSYTDEHAMLDAILAGASGYVVKDIKGMELAEAIKAVGAGRSLLDNRAAETLEARLRGAEGPLADLTEQERKLLALLGEGLTNRQIAARMFLAEKTVKNYVSRLLAKLGMERRTQAAVLATRLRDR GT:EXON 1|1-207:0| BL:SWS:NREP 1 BL:SWS:REP 1->203|YFIK_BACSU|5e-33|36.0|203/220| PROS 161->188|PS00622|HTH_LUXR_1|PDOC00542| BL:PDB:NREP 1 BL:PDB:REP 1->205|3c3wB|5e-69|66.3|205/210| RP:PDB:NREP 1 RP:PDB:REP 1->205|3c3wB|2e-36|78.5|205/210| RP:PFM:NREP 2 RP:PFM:REP 4->116|PF00072|4e-07|31.5|111/111|Response_reg| RP:PFM:REP 147->196|PF00196|7e-08|52.0|50/57|GerE| HM:PFM:NREP 3 HM:PFM:REP 4->116|PF00072|2.7e-23|30.4|112/112|Response_reg| HM:PFM:REP 145->201|PF00196|7.1e-19|38.6|57/58|GerE| HM:PFM:REP 105->152|PF04912|0.00044|33.3|48/387|Dynamitin| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0003700|"GO:transcription factor activity"|PF00196|IPR000792| GO:PFM GO:0005622|"GO:intracellular"|PF00196|IPR000792| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00196|IPR000792| GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF00196|IPR000792| RP:SCP:NREP 2 RP:SCP:REP 2->190|1s8nA|7e-19|20.9|187/190|c.23.1.1| RP:SCP:REP 161->205|1fseF|3e-11|33.3|45/50|a.4.6.2| HM:SCP:REP 1->181|1s8nA_|3.9e-28|29.1|179/190|c.23.1.1|1/1|CheY-like| OP:NHOMO 4197 OP:NHOMOORG 748 OP:PATTERN -----------------------------------2--1111111--11-----1-1-11-------- CFH3p75655432464422-26--5D222223C999DLKL6E7XGNB76EC9798757--9AI6aCOamaB6444A34-3319---1111-1--11---5-6133L4I43-------------------1------CEFED779J9B7895544322-11213574CCBE1-1--1112---167632122589777779A85A77997AA99598B94647624222222KR444434434444444344431---22-1--1222322222-1-11112223233333333333333311111121111113332222232472962223332232422221118221-D1213CB254225-32123---8213224-----28L8C2256468933333333333-8797ABA93A6-7666865997975411261456463441111111113212C26------------------------------1441-45424A67A876777588EK999A499DADGHH-1BABCD7779BBCF36A48857741111111-15A8834811172173551-42641572555656372-----------------------12--98154485642687895878986756968A--12423------86565856775654566-7666656666756556556767666538788888888788888766655653-666666566666--444444411111393411111211111-112222222222245EDFEADAF99AA88B9B---------234454555557479FBC8E8899A22221111443333--------2----------------------------1--1121113O- ------------------------------------------------------------------------------------------------------------2------------------------------------------------------1---------2-----------3--2---1-4---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 206 STR:RPRED 99.5 SQ:SECSTR cEEEEEEcccHHHHHHHHHHHHTcTTEEEEEEEccHHHHHHHHHHHcccEEEEccEETTEEHHHHHHHHHHHcTTcEEEEGGGcccHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHGGGccHHHHHHHHHHHHHHccTTTTccHHHHHHHHHHTTTccHHHHHHHHTccHHHHHHHHHHHHHHTTcccccHHHHHHHHHTc# DISOP:02AL 131-147| PSIPRED ccEEEEEcccHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHccccEEEcccccHHHHHHHHHHHHcccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcc //