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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56775.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  100/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.1.6
:424 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   62->424 3gwqA PDBj 3e-45 42.6 %
:RPS:PDB   46->400 2dy3B PDBj 3e-14 17.0 %
:RPS:SCOP  48->211 1b54A  c.1.6.2 * 4e-06 10.6 %
:HMM:SCOP  53->272 1bd0A2 c.1.6.1 * 5.6e-20 25.0 %
:HMM:PFM   54->262 PF01168 * Ala_racemase_N 1.4e-11 31.3 182/214  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56775.1 GT:GENE BAD56775.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2106612..2107886 GB:FROM 2106612 GB:TO 2107886 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56775.1 LENGTH 424 SQ:AASEQ MTGIDTRAVAALAGAVLGPEHKSIPPAAWGATVREFLAAAPALTELSTPLLTLDRSAMAANQALLGEWARSAGVRLAPHGKTTMAPQLWAQQLAAGCWAITLATAWQAQLARAFGVRRIVLANAVLDPVALRWLGAELARDPEFEFCCWVDSPASVALMAEHLADAPAGVRVDVVVELGGPGGRTGLRRVEDAHVVAEAVRREPRLRLAGVGGYEAALANTREPDAVAAVRHYLGELARLHRELAAADAYTGPALVTAGGSAYPDLVIEHLAGLADETGAHGVPTTVVLRSGAYLVHDDGFYAGISPLAGARTAQPLRAAMHGWARVISRPEPGLALLDGGKRDFPYDLGLPVPQGVPGATVSALNDQHAFLRLPDAADLAVGSVVRLGLSHPCTAFDKWRLIPVLDDSTAATPVVVDLVHTFF GT:EXON 1|1-424:0| SEG 8->18|avaalagavlg| SEG 178->189|lggpggrtglrr| SEG 234->247|lgelarlhrelaaa| BL:PDB:NREP 1 BL:PDB:REP 62->424|3gwqA|3e-45|42.6|331/397| RP:PDB:NREP 1 RP:PDB:REP 46->400|2dy3B|3e-14|17.0|306/340| HM:PFM:NREP 1 HM:PFM:REP 54->262|PF01168|1.4e-11|31.3|182/214|Ala_racemase_N| RP:SCP:NREP 1 RP:SCP:REP 48->211|1b54A|4e-06|10.6|160/230|c.1.6.2| HM:SCP:REP 53->272|1bd0A2|5.6e-20|25.0|200/0|c.1.6.1|1/1|PLP-binding barrel| OP:NHOMO 110 OP:NHOMOORG 101 OP:PATTERN -------------------------------------------------------------------- 1---2----------------1---2------11111111----121-----1-1--1------1-1111-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1--1-------------------------11---22-11111---1-----1------1-------------------------------------------------1--11-111111111111111111111111111111--1111----212211------------------------------------------------------------------------------------------------------------------------------1-------------------1-------------11-1---------------------1-------------------------------------1---------------------------1-----111------111-------------1-----2-111------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 378 STR:RPRED 89.2 SQ:SECSTR ##########################################ccccccEEEEEcHHHHHHHHHHHHHHHTTcEEEEEHHHHTTcHHHHHHHHHTTTccEEEEEEHHHHHHHHHTTcccEEEEEEcccGTTcccTTccHHHHHTTTcEEEEccHHHHHHHHTccccEEEEEEcccEEEccccccccccccHHHHHHHHHHHHHcTTEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHccccccccccHHHHTTcGGGcTTEEEcccGGGGTccccTEcGcccTTcTccccccccEEEEEEccEEEEccEEEEcccGGGccGGGTTTcEEEETTEEEEEEcccEEEEEETcTTcccTTcEEEEEEcTTcccHHHHcEEEEEcTTccEE####EEEEccc DISOP:02AL 1-5| PSIPRED cccccHHHHHHHHHHHcccHHccccccccccccHHHHHHccccccccccEEEEcHHHHHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHccccEEEEEcHHHHHHHHHcccccEEEEcccccHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHccccccEEEEEEEcccccccccccHHHHHHHHHHHHHcccEEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccHHEEEcccccccccccccccEEEEEEEccEEEEEcHHHHHHHHHHHccccccHHHHHHHEEEHHEEEccccEEEEEcccHHHHccccccEEEccccEEEEEEccccEEEEcccccccccccEEEEEcccccHHHHcccEEEEEccccEEEEEEEEEEEEcc //