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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56776.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  10/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1d.148.1
:179 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   2->44 2qkoB PDBj 2e-09 58.1 %
:RPS:PDB   5->179 3bqzB PDBj 2e-09 6.9 %
:RPS:SCOP  4->46 1jt0A1  a.4.1.9 * 2e-07 20.9 %
:RPS:SCOP  102->164 1nd7A  d.148.1.1 * 6e-04 15.9 %
:HMM:SCOP  1->75 1z77A1 a.4.1.9 * 2.9e-11 33.3 %
:HMM:PFM   8->54 PF00440 * TetR_N 8.7e-12 36.2 47/47  
:BLT:SWISS 2->44 YBJK_ECOLI 3e-05 39.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56776.1 GT:GENE BAD56776.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2107948..2108487) GB:FROM 2107948 GB:TO 2108487 GB:DIRECTION - GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD56776.1 LENGTH 179 SQ:AASEQ MPTRRELLLDAAIDLLGTRGARALTHRAVDDAAGMPAGSASNYFRTRDALLAALAERLEERDHADWTALSRMPAPTTVEQLVSAAATFVGHAVTTDRARTMARYALFLEAQADGPRDAVRRGRGRLTEWAAEQLRGVGADDAVAPILVDYLDGLILHGIVAPDFDPRPGLERMVAALVD GT:EXON 1|1-179:0| BL:SWS:NREP 1 BL:SWS:REP 2->44|YBJK_ECOLI|3e-05|39.5|43/178| SEG 47->62|rdallaalaerleerd| BL:PDB:NREP 1 BL:PDB:REP 2->44|2qkoB|2e-09|58.1|43/173| RP:PDB:NREP 1 RP:PDB:REP 5->179|3bqzB|2e-09|6.9|173/180| HM:PFM:NREP 1 HM:PFM:REP 8->54|PF00440|8.7e-12|36.2|47/47|TetR_N| RP:SCP:NREP 2 RP:SCP:REP 4->46|1jt0A1|2e-07|20.9|43/71|a.4.1.9| RP:SCP:REP 102->164|1nd7A|6e-04|15.9|63/374|d.148.1.1| HM:SCP:REP 1->75|1z77A1|2.9e-11|33.3|75/0|a.4.1.9|1/1|Homeodomain-like| OP:NHOMO 12 OP:NHOMOORG 10 OP:PATTERN -------------------------------------------------------------------- --------------1---------------------2111---1-1-------------------12--1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 178 STR:RPRED 99.4 SQ:SECSTR #ccHcHHHHHHHHHHHHHHTTTTccHHHHHHHTTccHHHHHHHTccHHHHHHHHHHHHHHHHHHHHHHHHHGGGcccHHHHHHHHHHHHHHccccGGGHHHHHHHHTTcccccccHHHHHHHHHHHHHHHHHHHHTTccccccHHHHHHHHHHHHHHHHHHTTTccHHHHHHHHHHHHH PSIPRED cccHHHHHHHHHHHHHHHHccccccHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHcc //