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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56788.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  11/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.144.1
:297 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   34->285 3dxqA PDBj 2e-06 17.3 %
:RPS:SCOP  175->266 1zylA1  d.144.1.6 * 1e-07 22.0 %
:HMM:SCOP  11->257 1nd4A_ d.144.1.6 * 3.5e-17 25.1 %
:HMM:PFM   33->241 PF01636 * APH 1.1e-17 26.4 193/238  
:BLT:SWISS 178->222 KHSE_PSEAE 1e-04 51.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56788.1 GT:GENE BAD56788.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2119930..2120823) GB:FROM 2119930 GB:TO 2120823 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56788.1 LENGTH 297 SQ:AASEQ MTADSGLPGRAALEDVCGAQGLSTQNARLLHRRSNAVWLVEDVVVRLAPNTPLRRTRAATSIGVTRWLETTATEPIALAPLPVDQPILTGDAVATLWPYRPTDYRPRTADLARLVRRLHAQPAPPVPLPEYRPLHRLREALDIDAARAAPALDPDDREWLRCRATDLVARFDATHFPLGRGLVHADAHTENVVRDGADWKLIDWDNACSGPRELDLAVTLPDHFHTPAADRTEFVTAYGYDPLEWPDWTVLRDIVELGSLGSYIRLAPTRPPAAHELRRRLASLRTGDRGVVWKPVG GT:EXON 1|1-297:0| BL:SWS:NREP 1 BL:SWS:REP 178->222|KHSE_PSEAE|1e-04|51.1|45/316| SEG 136->158|rlrealdidaaraapaldpddre| RP:PDB:NREP 1 RP:PDB:REP 34->285|3dxqA|2e-06|17.3|237/282| HM:PFM:NREP 1 HM:PFM:REP 33->241|PF01636|1.1e-17|26.4|193/238|APH| RP:SCP:NREP 1 RP:SCP:REP 175->266|1zylA1|1e-07|22.0|91/325|d.144.1.6| HM:SCP:REP 11->257|1nd4A_|3.5e-17|25.1|239/255|d.144.1.6|1/1|Protein kinase-like (PK-like)| OP:NHOMO 16 OP:NHOMOORG 11 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1----121----------------2---212121----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 250 STR:RPRED 84.2 SQ:SECSTR #################################cEEEEEETTEEEEE####EcccccHHHHHHHHHHHHHTTccccEEEEcTTTccEEEccTTcEEcHHHHHHcTTHHHHHHHHHHHHHTccccccccccHHHHHHHHHHHccccccTTHHHHHHHHHHHH#HHHHHHHHHHHcc#ccccEEEcccccGGGEEEEccccEEcccTTcEEEcTHHHHHHHHHHTTccHHHHHHHHHHHTccccHHHHHHHHHHHHHHHHHHHHHHHTTcTTccHHHHHHHHHHHHHHHHH######## DISOP:02AL 1-7| PSIPRED ccccccccHHHHHHHHHHHccccccccEEEEEcccEEEEcccEEEEEcccccccHHHHHHHHHHHHHHHHHccccccccccccccEEEEcccEEEEEccccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHcccccHHccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccccEEEccccEEEEEHHccccccHHHHHHHHHHHcccccHHHHHHHHHHcccccHHHccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccccccc //