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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56800.1
DDBJ      :             putative ABC transporter ATP-binding protein
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  903/915 : Eukaryota  188/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:276 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   24->222 2it1B PDBj 2e-33 41.1 %
:RPS:PDB   24->226 3dmdC PDBj 8e-35 9.5 %
:RPS:SCOP  25->212 1sgwA  c.37.1.12 * 3e-34 17.1 %
:HMM:SCOP  17->212 1ii8.1 c.37.1.12 * 3.2e-64 43.5 %
:RPS:PFM   63->165 PF00005 * ABC_tran 5e-22 53.4 %
:HMM:PFM   51->167 PF00005 * ABC_tran 1.5e-22 40.5 111/118  
:HMM:PFM   22->59 PF03193 * DUF258 1.8e-06 32.4 37/161  
:BLT:SWISS 5->259 Y412_METJA 9e-72 53.6 %
:PROS 139->153|PS00211|ABC_TRANSPORTER_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56800.1 GT:GENE BAD56800.1 GT:PRODUCT putative ABC transporter ATP-binding protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2129270..2130100 GB:FROM 2129270 GB:TO 2130100 GB:DIRECTION + GB:PRODUCT putative ABC transporter ATP-binding protein GB:PROTEIN_ID BAD56800.1 LENGTH 276 SQ:AASEQ MTATKLAVRGVRREFAVRGSAERFTALDDITLEVRAGEFLVLVGPSGSGKSTLLDLLGGLSTPTAGKILLDDEPVTGPGLDRGIVFQQYALLPWRTARANIEFGLEAKGVRRRERRQIADRYLDLVGLTGFGDRYPHELSGGMKQRVAIARSLAFDPEVLLMDEPFAALDAQTRESLQDELLRIWRATGKTILFITHGIDEAVYLGQRVAVLTSRPGRIKAVVDVDLEREAGEDIRSTEAFRAYRHRIWTLLRGEVARAQDEELTARTDESREVSA GT:EXON 1|1-276:0| BL:SWS:NREP 1 BL:SWS:REP 5->259|Y412_METJA|9e-72|53.6|250/267| PROS 139->153|PS00211|ABC_TRANSPORTER_1|PDOC00185| SEG 46->61|sgsgkstlldllggls| BL:PDB:NREP 1 BL:PDB:REP 24->222|2it1B|2e-33|41.1|197/361| RP:PDB:NREP 1 RP:PDB:REP 24->226|3dmdC|8e-35|9.5|189/318| RP:PFM:NREP 1 RP:PFM:REP 63->165|PF00005|5e-22|53.4|103/123|ABC_tran| HM:PFM:NREP 2 HM:PFM:REP 51->167|PF00005|1.5e-22|40.5|111/118|ABC_tran| HM:PFM:REP 22->59|PF03193|1.8e-06|32.4|37/161|DUF258| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 1 RP:SCP:REP 25->212|1sgwA|3e-34|17.1|181/200|c.37.1.12| HM:SCP:REP 17->212|1ii8.1|3.2e-64|43.5|193/370|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 35052 OP:NHOMOORG 1159 OP:PATTERN MLE6HDFDRQPPSOUGgHIHGFEMhLNgcUYOB6B998EEED9PWIUZJK*md8MSKPRGOEDBO168 QVgG*RQTaadKMISMLHG-GV88N*HHHHHGkbbce***LtR*l*mTadSKoniHPR55jeeb*iu***SURQQoUSOLfShA89ACKJIH2HAAD--8CJEGFMDQIF79999997AA8999EOLEKOHFQIOJcefrvDCBpSZTVcQQXSZNOGBGCHCTUPalkjJAEBBA8ADCA99VRSJJdX7ORmwxzvzw**k***xy**qllkn***SUc*lXbhhhefh**MVVUUUTTUVVVVUTNSQRSkVUOlkQJOOSccJKlmSKKPXZTWXXVWaZZdZcbYaZYXYXXXWYTTSSSTTSSUTTThTQRQRUUUTL*jurprpususWoVWuhhLVVPwWXeQwSWNG**aZRQXeOSXUXLFNTSJXUPPJECDCCUR***RKe*wl*mtxvyxtyrqs*-ji*fb*cz**M8**************CGJy*********JIJJJJJJkXaHOWVx44334333332234444343343344333CCEDE9s**q*******tpoqk****vtuvat***st*q7Hllgjejcd*h*z**QaWJOFJfPFFFFEFFOLMTbRTd*JWRbYNYiWViDZYVPTYcQSRTNRjpWgEFFHCDDDEBBB9BBBBBBBCM8CBIHcahFfHTGPGhIMNOMENQOMNLJONNMOM4-8GRMH1-----xp**Rtgjnnlkomogi-niijkjnkhkoojghihgg*****TSReecbeeeeeddcdcbd*fdaffdkO1rtuuxwvttxxx22BFBCABCHGGHLAuj*RRQOMNFIMIGPFISJLMLLCLCJLhPqlmpn***iw*que***BCB9ABBBCDWedhcddddknjqpONNKKKJHIHB9A933BMIIDDEE87665767b7KA99B7-87C8BB6AA96D99CB667JUYMNbncbbBSI ----GE7-LD34AEC74947BD67468775545A87476738723457698AC7568463331-22231-1-122111111222112--53446233434215DB6-6JPV9FFOHHA4839HDWW6T5**M3PCNDC94M69MG7D956K64*6IBER8K*5WBD5LFHmGMIB6376f24298WMP*6fS72UEJIB ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2, 258-276| PSIPRED ccccEEEEEEEEEEEccccccccEEEEEcccEEEccccEEEEEccccccHHHHHHHHHccccccccEEEEccEEcccccccEEEEEEcccccccccHHHHHHccHHHccccHHHHHHHHHHHHHHHccHHHHHcccHHccHHHHHHHHHHHHHHHcccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEccHHHHHHHccEEEEEcccccEEEEEEcccccccccHHHcccHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccc //