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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56814.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  7/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1
:233 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  13->86 2fd5A1 a.4.1.9 * 1.1e-08 20.3 %
:HMM:PFM   24->69 PF00440 * TetR_N 0.00046 28.3 46/47  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56814.1 GT:GENE BAD56814.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2141729..2142430 GB:FROM 2141729 GB:TO 2142430 GB:DIRECTION + GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD56814.1 LENGTH 233 SQ:AASEQ MSSVERRYAGDSAATRTRRRRATLIDVALSAMAENRWREATVDGLCRAARLNKRYFYESFDGLDALSDAVVDEVAAEVTAAAVSGYLPLLDRPVVEQARAAIGAAVDVLGADSRKALVLLGGVPATPVAHEKRTAAIRNLTAALVEHARTTHDIALERDSLAATAPAFVIGGTAQAILSWATGEMTISRDQLVADITALWLALDESAAGLARARLSAAGDISSGPAAGPRADR GT:EXON 1|1-233:0| SEG 13->23|aatrtrrrrat| SEG 63->84|ldalsdavvdevaaevtaaavs| SEG 206->219|saaglararlsaag| HM:PFM:NREP 1 HM:PFM:REP 24->69|PF00440|0.00046|28.3|46/47|TetR_N| HM:SCP:REP 13->86|2fd5A1|1.1e-08|20.3|74/0|a.4.1.9|1/1|Homeodomain-like| OP:NHOMO 8 OP:NHOMOORG 7 OP:PATTERN -------------------------------------------------------------------- ---------------------2---1-------1111-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-22, 209-233| PSIPRED ccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccc //