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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56826.1
DDBJ      :             putative acyl-CoA synthetase
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  120/915 : Eukaryota  101/199 : Viruses  0/175   --->[See Alignment]
c.69.1e.23.1
:982 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   676->858 3etcB PDBj 2e-05 26.2 %
:RPS:PDB   39->175 3c5lA PDBj 2e-12 9.6 %
:RPS:PDB   248->364 1bcrB PDBj 2e-04 11.9 %
:RPS:PDB   437->938 2d1rA PDBj 2e-20 13.7 %
:RPS:SCOP  59->223 1cvlA  c.69.1.18 * 9e-09 29.1 %
:RPS:SCOP  442->949 1md9A  e.23.1.1 * 5e-20 17.4 %
:HMM:SCOP  58->278 1ei9A_ c.69.1.13 * 2.2e-27 31.8 %
:HMM:SCOP  442->953 1pg4A_ e.23.1.1 * 3.4e-49 30.2 %
:RPS:PFM   88->345 PF11339 * DUF3141 7e-06 31.6 %
:RPS:PFM   341->372 PF10310 * DUF2413 2e-05 46.7 %
:RPS:PFM   468->857 PF00501 * AMP-binding 2e-10 27.7 %
:HMM:PFM   471->861 PF00501 * AMP-binding 2.5e-30 23.3 369/418  
:HMM:PFM   123->336 PF00561 * Abhydrolase_1 5.3e-07 20.7 179/231  
:BLT:SWISS 42->354 PHBC_CHRVI 7e-15 25.4 %
:BLT:SWISS 449->973 S27A2_RAT 1e-25 23.7 %
:PROS 139->148|PS00120|LIPASE_SER
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56826.1 GT:GENE BAD56826.1 GT:PRODUCT putative acyl-CoA synthetase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2149813..2152761 GB:FROM 2149813 GB:TO 2152761 GB:DIRECTION + GB:PRODUCT putative acyl-CoA synthetase GB:PROTEIN_ID BAD56826.1 LENGTH 982 SQ:AASEQ MKFSAKDVVGPVRRLMATAQNGLEVIRFGGLAHGVESSPFEVVERKRMYRLRHYFPDDAAPGRPVALLVPPLMVNADIWDVNAEGGAVGILHRGGIDCWVVDFGSPALEEGGWERDLADHVLAVSSAIDTVCAETGAEVHLMGYSQGGMFAYQTTAYRHGKGVASIVTFGSPVDIVNGVPFGLPYGLVSEFADFLADHVVTRLPITDSMVRVGFQLLDPVKTAKARIDFLRQLHDREALLPKERQRRFLNSEGWVGYAGPAVADLLKQFVAHNRMMLGGFVIRDQPISLAELKCPILAFVGEVDDIGQPAAVRGIVRAAPNAEVYESTLYAGHFGLVAGSVATNQTWPLVQRWIEWMDGDQPLPEEIGPMSEHTASNAPRSAATRIVNSAAALAEAGAGMGKALEGLAGSALRGSFELAGEAARALPRLTRLGMIQPNTRISLGLLLAEQARRAPLRELFLFDDRVHTNAAVDVRIDNVVRGLISVGIRPATRVGVVMETRPSALVAVAALSRLGAVAVLLAPGGELGRAMELTKTDTVIADPENLRHAASTGARVLVLGGGESRGLDIPASAEVIDLEQIDPAQVRLPAWYQPDPGLARELAFVLVTGTGDKLEIKYVTNHRWALSAFGTATSADLDRRDTVYCLAPLHHSSGLLVSLGGAVAGGSRIALARSLDPRRFAEEVHRYGVTVVTYTWTMLRDILDAEVFPAGHSHPIRLFIGSGMPAGLWRRTTEQFEPARVLEFYASIEGDVVLANVKGVKAGCKGRPVPGTARVELVAYDPVEGRIRTDDNGFARRCADNEVGLLIGKASEGVDLSAGGLRGVFAPGDAWMPTENLFRRDSDGDYWLVDRKDTVIKTPRGPVFGQPIVDVLNDIAAVDMEVAYGLDLGDHCLAVAAVCVRRGFQLEPKDVTEAMRALDPDQRPDLVYVVDEIPRSASYRPSTSAVRAAGRPRPGPDTWWYHRETESYEVLTEAEARALFGE GT:EXON 1|1-982:0| BL:SWS:NREP 2 BL:SWS:REP 42->354|PHBC_CHRVI|7e-15|25.4|295/355| BL:SWS:REP 449->973|S27A2_RAT|1e-25|23.7|519/620| PROS 139->148|PS00120|LIPASE_SER|PDOC00110| SEG 390->409|aaalaeagagmgkaleglag| SEG 504->522|alvavaalsrlgavavlla| SEG 649->667|lhhssgllvslggavaggs| BL:PDB:NREP 1 BL:PDB:REP 676->858|3etcB|2e-05|26.2|172/537| RP:PDB:NREP 3 RP:PDB:REP 39->175|3c5lA|2e-12|9.6|135/217| RP:PDB:REP 248->364|1bcrB|2e-04|11.9|109/152| RP:PDB:REP 437->938|2d1rA|2e-20|13.7|488/537| RP:PFM:NREP 3 RP:PFM:REP 88->345|PF11339|7e-06|31.6|244/556|DUF3141| RP:PFM:REP 341->372|PF10310|2e-05|46.7|30/434|DUF2413| RP:PFM:REP 468->857|PF00501|2e-10|27.7|361/405|AMP-binding| HM:PFM:NREP 2 HM:PFM:REP 471->861|PF00501|2.5e-30|23.3|369/418|AMP-binding| HM:PFM:REP 123->336|PF00561|5.3e-07|20.7|179/231|Abhydrolase_1| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF00501|IPR000873| GO:PFM GO:0008152|"GO:metabolic process"|PF00501|IPR000873| RP:SCP:NREP 2 RP:SCP:REP 59->223|1cvlA|9e-09|29.1|158/316|c.69.1.18| RP:SCP:REP 442->949|1md9A|5e-20|17.4|488/536|e.23.1.1| HM:SCP:REP 58->278|1ei9A_|2.2e-27|31.8|211/279|c.69.1.13|1/1|alpha/beta-Hydrolases| HM:SCP:REP 442->953|1pg4A_|3.4e-49|30.2|486/643|e.23.1.1|1/1|Acetyl-CoA synthetase-like| OP:NHOMO 559 OP:NHOMOORG 226 OP:PATTERN ------------------------1--111------------------------------------1- --------------32222-23112322222233333433----------------------1-------------------------------------------------------------------------11111-------11--1-----------1-----------------------------111111111111111------111-----------------------------------------------------------------------------------------------------------------------------------1-----------3--------------1111-------31----1-11-------------113111----1--------1------111-------------------11-11---------------------------------11-----------------------------1---1-------------------1---------------------1-------------------------1----------------------------------2----1--------1------1----------1-------------------------------------------------------------------------------------------------------42-----------------3333332---1-1111-1111--------------------------------1111111111------1-------------------------------------------------------- --------------131122211-2-23123-1---1------222--1----1---------11----1----1---------1-------1-------1-1122-3--G7A7884312135478-53DT7-7671413534842433251374326446A144-1723F2211--------------2----1111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 892 STR:RPRED 90.8 SQ:SECSTR ###cGGGTcccGGGcTTGGGcccTTcccEEEcEEEEEcHHHHHHTcTTccccccGGGGccGGGcccccEEEEETTccEEEEcTTccEEEEEcTTccEEEEEGGGccGGGHHHHHHHHHHHHHHcccTTTTccccccccccEEEEEEETTEEEEEETTccEEEEEEETTTccEEEEccTTccHHHHHHHcGGGHHHHHHTcTTHHHHTHHHHHHHHcccTTccccccTTTTTTTTcccccccccccccccccHHHHHHHHHHHHHHTTHHHHTTGGGHHHHHHHHGGGTTccccccEEEEEETTcccccGGGGTTGGGTcTTcEEEEEEccccccHHHHHHHcHHHHHHHHHHHHHHHHTccccc######################################################################ccccccccHHHHHHHHHHHHHHHTcEEEEETccEEEHHHHHHHHHHHHHHHHTccTTcEEEEEccccTTTHHHHHHHHHHTcEEEEEcTTHHHHHHHHHHcccEEEEcTTTHHHHHHTTccEEEETTcccccTTcccHHHHHHHTccTTccHHGGGcccccccTTTcEEEEEcccccccccccEEEEHHHHHHHTcTTTcccccTTcEEEEccccTTcHHHHHHHHHHHHTTcEEEEcccccHHHHHHHHHHTTEEEEEEcGGGHHHHHHcccGGccTTccEEEEccccccHHHHHHHHHHTTccccEEEEEcGGGccEEEETTcccTTcccEEcTTcTTcEEEEEcTTTcccccTTccEEEEEEcTTcccEETTcHHHEETTcHHHHHHHccTTccEEEEEEEEEcTTccEEEEEEGGGccccTTccccHHHHHHHHHTcTTEEEEEEEEEEETTTEEEEEEEEEcTTccccHHHHHHHHHccGGGccTTcEEEcccccccTTccccHHHHHHcccEEEEEEcTTTcTTT################# DISOP:02AL 1-7| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHEEccccEEEEEEEcccccccccEEEEEcccccccEEEEEEcccHHHHHHHHccccEEEEEcccccHHHccccccHHHHHHHHHHHHHHHHHHccccEEEEEEEHHHHHHHHHHHHHccccccEEEEEEccHHccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccHHHHHHHHHccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccEEEEEEEEcccccccccccHHHHHHccccccEEcHHHHHHHHHHHcccccEEHHHcccEEEEEEccHHHHHHccHHHHHHHHccccccccEEEEEEcccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccccHHHHHHHHHHHccccEEEEEcccEEcHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHccEEEEccccHHHHHHHHHcccEEEEEcHHHHHHHHHHcccEEEEcccccccccccccccHHHHHHHccccccccccccccccccccEEEEEccccccccccEEEcHHHHHHHHHHHHHHcccccccEEEEEccHHHHHHHHHHHHHHHHHccEEEEcccccHHHHHHHHHHccccEEEccHHHHHHHHHccccccccccEEEEEEEccccHHHHHHHHHHccccEEEEEEccccccEEEcccccccccccccccccccEEEEEEEcccccEEEEccccccEEcccccEEEEEEEccccccccHHHHHHHHccccccEEEccEEEEccccEEEEEcccccEEEEccEEEcHHHHHHHHHHcccEEEEEEEEEEccccccEEEEEEEcccccccHHHHHHHHHHccccccccEEEEEEccccccccHHHHHHHHHHHcccccccEEEEEcccccEEEccHHHHHHHHcc //