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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56829.1
DDBJ      :             putative mannosyltransferase
Swiss-Prot:             

Homologs  Archaea  20/68 : Bacteria  520/915 : Eukaryota  82/199 : Viruses  2/175   --->[See Alignment]
c.68.1
:365 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   31->151 2d7iA PDBj 6e-04 27.4 %
:RPS:PDB   31->252 2bo7A PDBj 1e-15 10.4 %
:RPS:SCOP  30->195 1h7lA  c.68.1.1 * 4e-15 12.2 %
:HMM:SCOP  24->203 1omzA_ c.68.1.15 * 1.7e-23 28.7 %
:RPS:PFM   31->171 PF00535 * Glycos_transf_2 1e-11 29.8 %
:HMM:PFM   31->170 PF00535 * Glycos_transf_2 1.3e-23 27.7 130/169  
:HMM:PFM   275->321 PF01891 * CbiM 0.00076 23.9 46/187  
:BLT:SWISS 30->335 ARNC_ESCF3 7e-24 32.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56829.1 GT:GENE BAD56829.1 GT:PRODUCT putative mannosyltransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2154625..2155722) GB:FROM 2154625 GB:TO 2155722 GB:DIRECTION - GB:PRODUCT putative mannosyltransferase GB:PROTEIN_ID BAD56829.1 LENGTH 365 SQ:AASEQ MPIPTARPHSADSATNGRPARPGVDRPHGISVVVPVYRGEQTIGPLVAELHRLATRTATPAGTDYVVEEIVLVHDNGPDRSDVVLQELDQRYPEVRVVWLSRNFGQDAATIAGMSVARGDWIVTMDEDGQHDPRFIGAFLDAALAQRADLVYSKPVNTRPHGFLRNLTSRGAKIVLATVFAFPDSTRFESYRLIRGDIGRQLAEVASNGAYLDVALTWVVGRVAQEPVVLRAEGREESGYNYRRLFSLFWKMVLCSGTRGLRLVSMLGVTLALAGGVMAAYVVYKALTTSQWAPEGWASIIVVLLLCSGAILFSLGLIAEYLGVALHILVGKPLFLTVASPTPRPGEPPAPTTTVTSRGTERVEH GT:EXON 1|1-365:0| BL:SWS:NREP 1 BL:SWS:REP 30->335|ARNC_ESCF3|7e-24|32.4|293/326| TM:NTM 3 TM:REGION 264->286| TM:REGION 296->318| TM:REGION 320->342| SEG 341->354|ptprpgeppapttt| BL:PDB:NREP 1 BL:PDB:REP 31->151|2d7iA|6e-04|27.4|113/536| RP:PDB:NREP 1 RP:PDB:REP 31->252|2bo7A|1e-15|10.4|211/375| RP:PFM:NREP 1 RP:PFM:REP 31->171|PF00535|1e-11|29.8|131/148|Glycos_transf_2| HM:PFM:NREP 2 HM:PFM:REP 31->170|PF00535|1.3e-23|27.7|130/169|Glycos_transf_2| HM:PFM:REP 275->321|PF01891|0.00076|23.9|46/187|CbiM| RP:SCP:NREP 1 RP:SCP:REP 30->195|1h7lA|4e-15|12.2|156/239|c.68.1.1| HM:SCP:REP 24->203|1omzA_|1.7e-23|28.7|164/0|c.68.1.15|1/1|Nucleotide-diphospho-sugar transferases| OP:NHOMO 875 OP:NHOMOORG 624 OP:PATTERN ---1----1111111----1-1----------1-------------11--11-1122-2--------- 112-1------------11-1---1-11111-----12---1-------11---------21--1-1-3----------1-2-111111111-211----21111147-1---------------1212222223211133----1244343511--11-11122-22224112111111111-----1-11-1111111-111-111-1-112111--1--1--1--2-1-21--------------1---11111321--11111123--1221-1311111111111111111111111111111111111--111---21--21111111111-1-22----1-2---1---112------1---2----11-112-----11222111121111111111111--1111121--42-1---2212221111-1--------1--111111112---2211-----------------------------------111123222231111111122222123113133112311-1111--11-342111111-------112-32-132-2-115422--643122311--3--1-2---1-------------------1-222211121-----------1------11-21------1------11211112111211111-1121111111112112112112111112-2332234342323511-122213-111111111-11--1-1111111112--11-----1---------111-1-11---122221121-1112--21211211111----1-----1-1--22222222222222--2-111122-----------------------------------------------22 ---111------11111----------------111----------11--------1-1111--1----1----1------1111111-2111111---1-2-111----2-1--1-----11-11-1-121-111--------1-1---1--1---11-----11-111---11-1----1111-132-111-1111- ---------------------------------------------------1-1------------------------------------------------------------------------------------------------------------------------- STR:NPRED 282 STR:RPRED 77.3 SQ:SECSTR ##ccTTccccccccGGcHHHHHHHTTTccEEEEEEEccccHHHHHHHHHHHHHccccEccGGTcTTcccEEEEEEccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccEEEEccTTcccccHHHHHHHHHHHHHTccEEEEEccccTTccHHHHHTHHHcTTccGGGcccTTcccEEEEHHHHHHHHHcHHHHTcccTTHHHHHHHTTccEEEEEcTTcccccccHHHHHHHHHHHHHHHTTccccccccEEccccEEcccc###ccccccHHHH############################################################################## DISOP:02AL 8-27, 342-365| PSIPRED cccccccccccccccccccccccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEccccccHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHHHcccEEEEccccEEccccHHHHHHHHHHHHHHHHHHcccccccccccEEEcHHHHHHHHccccccHHHHHHHHHHcccEEEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEccccccccHHHHHHHHHHHHHccc //