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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56840.1
DDBJ      :             putative hydrolase
Swiss-Prot:             

Homologs  Archaea  35/68 : Bacteria  368/915 : Eukaryota  160/199 : Viruses  0/175   --->[See Alignment]
c.108.1
:302 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   17->267 1zjjB PDBj 3e-33 32.8 %
:RPS:PDB   2->267 2cfsA PDBj 2e-30 34.6 %
:RPS:SCOP  15->265 1wviA  c.108.1.14 * 3e-60 34.8 %
:HMM:SCOP  14->269 1wviA_ c.108.1.14 * 5.1e-52 41.4 %
:HMM:PFM   17->228 PF00702 * Hydrolase 2.3e-10 20.8 183/192  
:BLT:SWISS 15->265 NAGD_STAS1 1e-31 37.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56840.1 GT:GENE BAD56840.1 GT:PRODUCT putative hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2171011..2171919 GB:FROM 2171011 GB:TO 2171919 GB:DIRECTION + GB:PRODUCT putative hydrolase GB:PROTEIN_ID BAD56840.1 LENGTH 302 SQ:AASEQ MRRSGSGVTRLRDRYEALLLDLDGTLYRGPVVIAGAPEALAAAATSQRLAYVTNNASRGPAVVAAHLAELGFPARAEDVVTSAQAAVRLLAERLEPGATVLVVGTDDLAAEVEEAGLKPIRRFDGAPPAAVVQGHSPQTAWPDLAEAAYAVRAGALWVAANTDRTLPNERGLAPGNGAMVAALQAATDRAPVVAGKPYAPLLEDAVARVGTRAALVVGDRLDTDIEGADRVALDSLLVLTGVSTLDELRAAPPERIPTYVAESLDALNHPPVADDAELDLAERLRKYPGRAVTVRASRSEIR GT:EXON 1|1-302:0| BL:SWS:NREP 1 BL:SWS:REP 15->265|NAGD_STAS1|1e-31|37.2|242/259| SEG 34->44|agapealaaaa| BL:PDB:NREP 1 BL:PDB:REP 17->267|1zjjB|3e-33|32.8|250/263| RP:PDB:NREP 1 RP:PDB:REP 2->267|2cfsA|2e-30|34.6|266/291| HM:PFM:NREP 1 HM:PFM:REP 17->228|PF00702|2.3e-10|20.8|183/192|Hydrolase| RP:SCP:NREP 1 RP:SCP:REP 15->265|1wviA|3e-60|34.8|244/253|c.108.1.14| HM:SCP:REP 14->269|1wviA_|5.1e-52|41.4|249/0|c.108.1.14|1/1|HAD-like| OP:NHOMO 781 OP:NHOMOORG 563 OP:PATTERN 11-11-1111111111---2---122212-11-----------11--11-----1111111---1--- ---1222222212121122-21--122222213222233313212421222222211211222322322221111111----1--1--------------------1121--------------------------22222---33------------------------------------------11-113111111111111111421112111112121111111121111111111111111111111111111111111111111111-11111111111111111111211111111111111111111111111111-2-------1-1-------------1-----------------1-2-1-11----------111--------------------1--1111---------1----------111------------------------1------------------------------------------------------1------------------------------------1-----------11---1----11--111-----------------------------------------1---11--------1111111111111111-111----1-1------11--1111111111111-1111111111111111111111-----11111111111111111111--11--111-11111111-------------1--1---------------------------1---------------21---------1-------------------------------1--1111------------------------------------1111111111--- ----112-31--1121111-2211-11----1--1-1111-11111111111-1111111111-11-11-1-11111-111---1211-11111112221111323-2213443311212--3334-4-3C3-324-3--4-222-21-121162212222114111432243111221G2121122421321211111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 283 STR:RPRED 93.7 SQ:SECSTR #EccHHHHHHHHHHccEEEEcccTTTEETTEEcTTHHHHHHHHHHTTEEEEEEccccccHHHHHHHHHHTTccccGGGEEEHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHTTcEETccTTcccccEEEEcccTTccHHHHHHHHHHTcTTcEEEEcccccEEEcTTccEEcHHHHHHHHHHHHTcccEEccTTcTHHHHHHTTcccccGGEEEEccTTTHHHHHHHTTcEEEEETTccccHHHHHHHcGGGcccEEEccGGGGHH###HHHHHHHHHHHTTcE############### DISOP:02AL 1-7, 297-298, 300-302| PSIPRED ccccHHHHHHHHHHccEEEEEccEEEEEcccccHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHccccccHHHEEccHHHHHHHHHHHcccccEEEEEcccHHHHHHHHcccEEEcccccccccEEEEEccccccHHHHHHHHHHHHcccEEEEEccccccccccccEEcccHHHHHHHHHHccEEEEEEcccHHHHHHHHHHccccEEEEEcccHHHHHHHHHHccccEEEEEcccccHHHHHHccccccccEEEEcHHHHcccccccccccccccHHHcccccEEEEcccHHccc //