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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56848.1
DDBJ      :             putative dehydrogenase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  3/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.1.16
:267 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   14->182 1z69A PDBj 5e-06 28.9 %
:RPS:PDB   1->184 1bslB PDBj 7e-15 7.2 %
:RPS:SCOP  1->184 1brlA  c.1.16.1 * 5e-15 16.0 %
:HMM:SCOP  1->268 1rhcA_ c.1.16.3 * 9e-43 34.4 %
:RPS:PFM   26->105 PF00296 * Bac_luciferase 1e-06 38.8 %
:HMM:PFM   1->218 PF00296 * Bac_luciferase 3.6e-44 38.8 214/307  
:BLT:SWISS 14->182 MER_METTI 6e-09 28.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56848.1 GT:GENE BAD56848.1 GT:PRODUCT putative dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2178069..2178872) GB:FROM 2178069 GB:TO 2178872 GB:DIRECTION - GB:PRODUCT putative dehydrogenase GB:PROTEIN_ID BAD56848.1 LENGTH 267 SQ:AASEQ MEIGVILPTSTPDPARPILGDVRASARFAEEIGLDSVWSTDHLIASAPMLDSTVVLATAAAVTERIRIGYGVLLLALRPAAWAAKQIASLQYVSGDRLLLGIGTGNPAHGDIGWRAAGASFAERGRTTDAALRVLPDLIAGRTTALPDGTEVALSPGATVPPVLVAGDGPRARRRAAEFAQGWIAIAATPEQAAAGGRELAELAAGFGRPTPGITVVAPPLGQDSNRWPELLAQYADAGVERLTLAPTGPDWRADYETAAKVQALVG GT:EXON 1|1-267:0| BL:SWS:NREP 1 BL:SWS:REP 14->182|MER_METTI|6e-09|28.5|158/326| SEG 53->63|tvvlataaavt| SEG 73->84|lllalrpaawaa| SEG 171->177|rarrraa| SEG 185->206|aiaatpeqaaaggrelaelaag| BL:PDB:NREP 1 BL:PDB:REP 14->182|1z69A|5e-06|28.9|159/327| RP:PDB:NREP 1 RP:PDB:REP 1->184|1bslB|7e-15|7.2|181/324| RP:PFM:NREP 1 RP:PFM:REP 26->105|PF00296|1e-06|38.8|80/296|Bac_luciferase| HM:PFM:NREP 1 HM:PFM:REP 1->218|PF00296|3.6e-44|38.8|214/307|Bac_luciferase| RP:SCP:NREP 1 RP:SCP:REP 1->184|1brlA|5e-15|16.0|181/340|c.1.16.1| HM:SCP:REP 1->268|1rhcA_|9e-43|34.4|259/0|c.1.16.3|1/1|Bacterial luciferase-like| OP:NHOMO 3 OP:NHOMOORG 3 OP:PATTERN -------------------------------------------------------------------- ---------------1--------------------1------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 255 STR:RPRED 95.5 SQ:SECSTR cEEEEEEcccccccHHHHHHHHHHHHHHHHcccccEEEEccccccccccccHHHHHHHHHHTccccEEEEEEEEGGGccHHHHHHHHHHHHHHTTccEEEEEEccccHccHHHHHHTTcccTTHHHHHHHHHHHHHHHHHccccccccEEcccccccTTcccEEEEcccHHHHHHHHHHTccEEcccHHHHHHHHHHHHHHHHHHcTTccccEEEEETTEEEEcHHHHHHHHHHHHHHTccEEEEEcTTccccHH############ PSIPRED cEEEEEEcccccccHHHHHHHHHHHHHHHHHccccEEEEccccccccccccHHHHHHHHHHHccccEEEEEEEEcccccHHHHHHHHHHHHHHccccEEEEEcccccHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccccccccccEEEEccccccccEEEEcccHHHHHHHHHHccEEEEccccHHHHHHHHHHHHHHHHHccccHHHEEEEEccccccHHHHHHHHHHHHHccccEEHHcccccHHHHHHHHHHHHHHHcc //