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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56859.1
DDBJ      :             putative GTP-binding protein
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  908/915 : Eukaryota  115/199 : Viruses  0/175   --->[See Alignment]
c.37.1d.52.5
:472 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   37->429 1mkyA PDBj 2e-43 36.7 %
:RPS:PDB   35->399 2e87A PDBj 6e-35 15.3 %
:RPS:SCOP  37->154 1h65A  c.37.1.8 * 3e-17 20.8 %
:RPS:SCOP  211->379 1zd9A1  c.37.1.8 * 4e-20 11.2 %
:RPS:SCOP  384->459 1mkyA3  d.52.5.1 * 1e-18 23.6 %
:HMM:SCOP  34->197 1jalA1 c.37.1.8 * 5.9e-42 36.4 %
:HMM:SCOP  170->466 1f5nA2 c.37.1.8 * 2e-65 38.5 %
:RPS:PFM   37->155 PF02421 * FeoB_N 2e-08 34.2 %
:RPS:PFM   211->383 PF02421 * FeoB_N 2e-09 33.7 %
:HMM:PFM   47->152 PF01926 * MMR_HSR1 2.1e-21 34.0 106/108  
:HMM:PFM   220->328 PF01926 * MMR_HSR1 1.5e-20 34.0 106/108  
:HMM:PFM   284->379 PF00009 * GTP_EFTU 7.8e-11 22.9 96/189  
:HMM:PFM   36->56 PF03205 * MobB 0.00071 42.9 21/137  
:BLT:SWISS 9->460 ENGA_MYCTU e-158 68.8 %
:REPEAT 2|38->161|211->341
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56859.1 GT:GENE BAD56859.1 GT:PRODUCT putative GTP-binding protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2189648..2191066 GB:FROM 2189648 GB:TO 2191066 GB:DIRECTION + GB:PRODUCT putative GTP-binding protein GB:PROTEIN_ID BAD56859.1 LENGTH 472 SQ:AASEQ MSEDVLAGDGVWSDESDWEIADLEGEQEGEAQQAMPTLAVVGRPNVGKSTLVNRILGRREAVVEDIPGVTRDRVSYEATWAGRRFLVQDTGGWEPDAKGLQQAVARQAELAMATADAILLVVDATVGATATDEAAVKKLRRSQIPVILVANKVDDQRLEAEAAALWSLGLGEPRMVSAAHGRGTGDLLDDVLEVLPETPREGTGGTGPRRVALVGKPNVGKSSLLNKLAGDERSVVHDVAGTTVDPVDSLVELGGKIWKFVDTAGLRRKVSNASGTEFYASLRTKSALEASEVAIMLIDASQPITEQDLRVISLVADSGRALVLAFNKWDLVDEDRRLQLEKEVDRELVRVPWAQRVNISAHTGRAVQKLVPAMETALESWDKRISTGRLNNWLKEVVAATPPPMRGGRLPRVLFATQAATRPPTFVLFTTGFLEAGYRRFLERRLREEFGFDGSPVRISVRVREKRERGRK GT:EXON 1|1-472:0| BL:SWS:NREP 1 BL:SWS:REP 9->460|ENGA_MYCTU|e-158|68.8|448/463| NREPEAT 1 REPEAT 2|38->161|211->341| SEG 24->34|egeqegeaqqa| SEG 186->210|dllddvlevlpetpregtggtgprr| SEG 439->450|rrflerrlreef| SEG 461->471|vrvrekrergr| BL:PDB:NREP 1 BL:PDB:REP 37->429|1mkyA|2e-43|36.7|354/400| RP:PDB:NREP 1 RP:PDB:REP 35->399|2e87A|6e-35|15.3|347/353| RP:PFM:NREP 2 RP:PFM:REP 37->155|PF02421|2e-08|34.2|115/188|FeoB_N| RP:PFM:REP 211->383|PF02421|2e-09|33.7|163/188|FeoB_N| HM:PFM:NREP 4 HM:PFM:REP 47->152|PF01926|2.1e-21|34.0|106/108|MMR_HSR1| HM:PFM:REP 220->328|PF01926|1.5e-20|34.0|106/108|MMR_HSR1| HM:PFM:REP 284->379|PF00009|7.8e-11|22.9|96/189|GTP_EFTU| HM:PFM:REP 36->56|PF03205|0.00071|42.9|21/137|MobB| GO:PFM:NREP 8 GO:PFM GO:0005525|"GO:GTP binding"|PF02421|IPR011619| GO:PFM GO:0015093|"GO:ferrous iron transmembrane transporter activity"|PF02421|IPR011619| GO:PFM GO:0015684|"GO:ferrous iron transport"|PF02421|IPR011619| GO:PFM GO:0016021|"GO:integral to membrane"|PF02421|IPR011619| GO:PFM GO:0005525|"GO:GTP binding"|PF02421|IPR011619| GO:PFM GO:0015093|"GO:ferrous iron transmembrane transporter activity"|PF02421|IPR011619| GO:PFM GO:0015684|"GO:ferrous iron transport"|PF02421|IPR011619| GO:PFM GO:0016021|"GO:integral to membrane"|PF02421|IPR011619| RP:SCP:NREP 3 RP:SCP:REP 37->154|1h65A|3e-17|20.8|118/257|c.37.1.8| RP:SCP:REP 211->379|1zd9A1|4e-20|11.2|160/164|c.37.1.8| RP:SCP:REP 384->459|1mkyA3|1e-18|23.6|72/81|d.52.5.1| HM:SCP:REP 34->197|1jalA1|5.9e-42|36.4|162/0|c.37.1.8|1/2|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 170->466|1f5nA2|2e-65|38.5|265/0|c.37.1.8|2/2|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 2433 OP:NHOMOORG 1025 OP:PATTERN ------------------------------------1--------------------1---------- 3331111111111211111-1111111111111111111111111111111111111111211111111111-111111223232333442333332213333332232322222222222222222222222222333331113133333322333232223323333331233322223333332233133333333333333333333333333333343333333333333333332233333333323323333333233333333322223333333333333333333333333333333333333333333333333343333333333334443333445232333422444433334433333342122212122112212222323322222222222-221322312231222222222233222332223233233222222223222222322211111223323331222222211111-2233222222333433333333333333333333333322333233333333332333433332222233232333243233231241112233333332222211342222222222222222222222222333333323222333333333443324223222-2313111111133333333333333333-33333333333333333333332333333332233223333333333333331333333333333223333333333333333333333333223333333333322232333333332333333333333333333222233333333223342322334333333322222221112132212322222-22222223332222121123334433343112 11--11-1311----1111111-1111111111111-1111111111111111111111111--1-1111111-111-11---11----1--1--------11121--414-1-1-------------------------------------------1----2-1-111111113331M3314451141542231112 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 425 STR:RPRED 90.0 SQ:SECSTR ##################################TTTcccccHHHHHHHHHHHHHHHHHHTccccccHHHHHHHHHHHHHHHHHHHHHHHHcccGGGHHHHHHcccGGGccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHTcHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHGGGcccccccccEEEEEccTTccHHHHHHHHcccccEEEccTTccccEEEEEEEETTEEEEEEEcTTTcccccTTccHHHHHHHHGGTccEEEEEEcTTcTTcccHHHHHHHHHHHHHHTTTccEEEEEccTTTccHHHHHHHHHHHHHTHHHHHTcccEEccTTTTcTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTcHHHHTTccccccHHHHHHHHHTTcHHHHHccccEEEHHHHHHHHHHHHHHHccTTcccEE############# DISOP:02AL 22-34, 463-472| PSIPRED cccHHHHHHccccccccEEEEEcccHHHHHHHHcccEEEEEEcccccHHHHHHHHHccccEEEccccccEEEEEEEEEEEccEEEEEEEcccEEEccHHHHHHHHHHHHHHHHcccEEEEEEEccccccHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEcccccHHHHHHHHHccccEEEccccccEEEEEEEEEEEccEEEEEEEccccccccccHHHHHHHHHHHHHHHHccccEEEEEEEccccccHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccccEEEEEEEEEEccccccEEEEEEcccccHHHHHHHHHHHHHHccccccEEEEEEEcccccccccc //