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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56875.1
DDBJ      :             putative protease
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  76/915 : Eukaryota  11/199 : Viruses  0/175   --->[See Alignment]
c.41.1d.16.1
:399 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   92->214 1nduA PDBj 4e-13 45.8 %
:RPS:PDB   91->215 1ak9A PDBj 1e-20 31.5 %
:RPS:SCOP  92->210 1a2qA  c.41.1.1 * 4e-21 30.3 %
:RPS:SCOP  341->394 2gmhA2  d.16.1.8 * 2e-04 13.7 %
:HMM:SCOP  87->397 1v6cA_ c.41.1.1 * 1e-51 42.2 %
:RPS:PFM   104->210 PF00082 * Peptidase_S8 6e-08 46.2 %
:HMM:PFM   102->357 PF00082 * Peptidase_S8 2.3e-34 37.8 225/307  
:BLT:SWISS 93->210 ISP_PAEPO 5e-13 39.0 %
:PROS 111->122|PS00136|SUBTILASE_ASP
:PROS 337->347|PS00138|SUBTILASE_SER
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56875.1 GT:GENE BAD56875.1 GT:PRODUCT putative protease GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2210614..2211813 GB:FROM 2210614 GB:TO 2211813 GB:DIRECTION + GB:PRODUCT putative protease GB:PROTEIN_ID BAD56875.1 LENGTH 399 SQ:AASEQ MSEPTHVLAGEKLVVLRAPARAVLREPNAGPAAFPAEVAADVRIDIDEVDAATLRSVAADPTVVGFGPAMPMRLVEPAERGGVVAAAAGPTWGVEAVGATTSPFTGQGVTVAVLDTGIDADHPAFAGVDLVTRDFTGGGSAHDKDGHGTHCAGTIFGRDLDGTRIGVARGVGRALIGKVLGPGGGGSDTIAEAILWARDNGAHVISMSLGIDFPGFVEKLVTLRGLSIPVATSLALRAYTANVQLFETLSQFLAAGIGQPMVVAATGNESGRDRTPPFEIDVAPPAAAAGIVAVGALGRTANGLAVAPFSNARATVSAPGVGVVSAAVGGGTESMSGTSMATPHAAGVAALWAEKLAAQGQLAPLVLQAKLIGEATTDRLIPGTDPTDTGAGLVRAPQS GT:EXON 1|1-399:0| BL:SWS:NREP 1 BL:SWS:REP 93->210|ISP_PAEPO|5e-13|39.0|118/326| PROS 111->122|PS00136|SUBTILASE_ASP|PDOC00125| PROS 337->347|PS00138|SUBTILASE_SER|PDOC00125| SEG 29->40|agpaafpaevaa| SEG 75->90|vepaerggvvaaaagp| SEG 181->186|gpgggg| SEG 282->296|vappaaaagivavga| SEG 314->340|atvsapgvgvvsaavgggtesmsgtsm| BL:PDB:NREP 1 BL:PDB:REP 92->214|1nduA|4e-13|45.8|118/269| RP:PDB:NREP 1 RP:PDB:REP 91->215|1ak9A|1e-20|31.5|124/275| RP:PFM:NREP 1 RP:PFM:REP 104->210|PF00082|6e-08|46.2|106/285|Peptidase_S8| HM:PFM:NREP 1 HM:PFM:REP 102->357|PF00082|2.3e-34|37.8|225/307|Peptidase_S8| GO:PFM:NREP 2 GO:PFM GO:0004252|"GO:serine-type endopeptidase activity"|PF00082|IPR000209| GO:PFM GO:0006508|"GO:proteolysis"|PF00082|IPR000209| RP:SCP:NREP 2 RP:SCP:REP 92->210|1a2qA|4e-21|30.3|119/275|c.41.1.1| RP:SCP:REP 341->394|2gmhA2|2e-04|13.7|51/99|d.16.1.8| HM:SCP:REP 87->397|1v6cA_|1e-51|42.2|263/0|c.41.1.1|1/1|Subtilisin-like| OP:NHOMO 122 OP:NHOMOORG 92 OP:PATTERN -------------------1---1------1--------------------2------1--------- ------------------------------------1-11-----1--------1-----24--311345-----------------------------------1----------------------1------1111-----1--1-----------1---1---1-1-----1-------211-------------11--11-2211-221--11--2----------12----------------------------------------------------------------------------------------------------------111----------------1----1-1----------------------1--------------------------2-------------1---------1------------------------------------------------------------1-------------------------------------------------------------------2--2----------------1-1---------2-1----------------------------------------------111-----------------------------------------------------------------------------------------------------------1-----------------------------------------------1------------------------111111----------------------------------------------------------------1--1--1------ --------------12-1-------------------------------1-1-1-------------------------------------------------1-11----------------------------------------------------------------------------------1--2------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 176 STR:RPRED 44.1 SQ:SECSTR ##########################################################################################cHHHHHTTHHHHTcccTTcEEEEEEccccTTcTTccEEEEEEccTTcccTTcccccHHHHHHHHHHccccccccccccTTcEEEEEEEcccTTccccHHHHHHHHHHHHTTccEEEEccccccccHHHHHHHHTTcEEEEEcEEcEEcccccHHHHHHHHHHHHTTc###EEEEEcccc################################################################################################################################## DISOP:02AL 1-3, 24-25, 28-30| PSIPRED ccccccccccEEEEEEEccHHHHHHHHHHHHHHHHHHHHccEEEEEEEccHHHHHHHHHcccEEEEEccEEEEEEccccccccccccccccccccccccccccccccccEEEEEEcccccccHHHcccEEcccccccccccccccccHHHHHHHHHHccccccEEEEcccccEEEEEEEEccccccHHHHHHHHHHHHHccccEEEEccccccccccccHHHHHcccccHHHHHHHccccccccHHHHHHHHHHcccccEEEEEEcccccccccccccccccccccccccEEEEEEcccccccccccccccccEEEEccccEEEEEEccccEEEccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccccccccccccEEccEEEcccc //