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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56880.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.118.8a.35.1
:322 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   10->61 3f52E PDBj 2e-05 40.4 %
:RPS:PDB   10->102 2ebyA PDBj 5e-05 19.8 %
:RPS:SCOP  6->113 1s4kA  a.35.1.6 * 2e-05 12.0 %
:RPS:SCOP  147->240 1hz4A  a.118.8.2 * 2e-05 16.0 %
:HMM:SCOP  1->79 1y9qA1 a.35.1.8 * 3.5e-05 21.5 %
:HMM:SCOP  141->303 1kt1A1 a.118.8.1 * 3.2e-05 19.3 %
:HMM:PFM   114->163 PF00823 * PPE 0.00056 28.0 50/159  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56880.1 GT:GENE BAD56880.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2214875..2215843) GB:FROM 2214875 GB:TO 2215843 GB:DIRECTION - GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD56880.1 LENGTH 322 SQ:AASEQ MFTDGASVSGGLLRELRTVAGIGLRTMAVRTNYTVGYLSLVETGRKPVTTSVLAGYRAVLGDPLIGMPDVDPERVQATVTDPASAGRSSLDDVATILERARRLEDTAGPELVVTMVRGMDGVARALAAARVGGASAAGLAAEVATYRGWLEHDTGKYCAATKAFTDAALLAQEAGDHSQLAHALCFRAFTTQRQGQLAHALDLTGSAARVTGAHPVLGVYAAHQRAELLAMRGDRRQSEKALARAESAAVAADGVDLPTFGYWYTSGYWAVHRGVVLSLLGRVPEAVREAEQGLTVMPEEHRKAGWMATLLRELHPEMNDYP GT:EXON 1|1-322:0| SEG 121->144|gvaralaaarvggasaaglaaeva| SEG 241->252|alaraesaavaa| BL:PDB:NREP 1 BL:PDB:REP 10->61|3f52E|2e-05|40.4|52/78| RP:PDB:NREP 1 RP:PDB:REP 10->102|2ebyA|5e-05|19.8|91/102| HM:PFM:NREP 1 HM:PFM:REP 114->163|PF00823|0.00056|28.0|50/159|PPE| RP:SCP:NREP 2 RP:SCP:REP 6->113|1s4kA|2e-05|12.0|108/120|a.35.1.6| RP:SCP:REP 147->240|1hz4A|2e-05|16.0|94/366|a.118.8.2| HM:SCP:REP 1->79|1y9qA1|3.5e-05|21.5|79/0|a.35.1.8|1/1|lambda repressor-like DNA-binding domains| HM:SCP:REP 141->303|1kt1A1|3.2e-05|19.3|145/168|a.118.8.1|1/1|TPR-like| OP:NHOMO 2 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- ------------------------------------2-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 96 STR:RPRED 29.8 SQ:SECSTR #########HHHHHHTTTTTTccHHHHHHHHTccHHHHHHHHTTcccccHHHHHHHHHHHTHHHHHHHHHHHHHHHTcHHHHHHHHHcccccHHHHHHHHHHHHH######################################################################################################################################################################################################################### DISOP:02AL 1-2, 75-86, 318-322| PSIPRED ccccEEEEEcHHHHHHHHHccccHHHHHHHHcccHHHHHHHHcccccccHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccccccccEEEcHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc //