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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56882.1
DDBJ      :             putative hydrolase
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  274/915 : Eukaryota  51/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:271 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->130 1va4A PDBj 5e-13 34.7 %
:RPS:PDB   8->264 3e3aB PDBj 8e-35 22.6 %
:RPS:SCOP  6->263 1mt3A  c.69.1.7 * 7e-32 21.1 %
:HMM:SCOP  1->271 1bn7A_ c.69.1.8 * 1.3e-53 29.5 %
:RPS:PFM   51->129 PF00561 * Abhydrolase_1 4e-10 43.0 %
:HMM:PFM   50->156 PF00561 * Abhydrolase_1 4.9e-19 40.8 76/231  
:HMM:PFM   164->257 PF00561 * Abhydrolase_1 3.4e-08 23.6 89/231  
:HMM:PFM   22->76 PF12146 * Hydrolase_4 1.9e-05 36.4 55/79  
:BLT:SWISS 6->135 YISY_BACSU 4e-13 33.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56882.1 GT:GENE BAD56882.1 GT:PRODUCT putative hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2216329..2217144 GB:FROM 2216329 GB:TO 2217144 GB:DIRECTION + GB:PRODUCT putative hydrolase GB:PROTEIN_ID BAD56882.1 LENGTH 271 SQ:AASEQ MVDVPYIENNGVKIHFTDTGGSGRAVVLGHGFFLDQEMFAAQAAGLAPDYRVIAIDARGFGGTEDSGEPFSYWDLARDAWAVVDALGLDRVVAGGMSQGGFTALRMALLAPPRVDGLILIGTSAEAYTPKQKIGYREVMDAWTGSGPLAPIAKTMASVMIGGTDEDRRPWLDKWSTGDRRRIRLAADCLINRESITELIGEITCPALLLRGISDQAFAAEDMEALAASLGGPTRFHTIPGATHAVNITHPREVNALLREWLAQLDGTPSQS GT:EXON 1|1-271:0| BL:SWS:NREP 1 BL:SWS:REP 6->135|YISY_BACSU|4e-13|33.8|130/268| SEG 216->227|afaaedmealaa| BL:PDB:NREP 1 BL:PDB:REP 6->130|1va4A|5e-13|34.7|124/271| RP:PDB:NREP 1 RP:PDB:REP 8->264|3e3aB|8e-35|22.6|252/275| RP:PFM:NREP 1 RP:PFM:REP 51->129|PF00561|4e-10|43.0|79/211|Abhydrolase_1| HM:PFM:NREP 3 HM:PFM:REP 50->156|PF00561|4.9e-19|40.8|76/231|Abhydrolase_1| HM:PFM:REP 164->257|PF00561|3.4e-08|23.6|89/231|Abhydrolase_1| HM:PFM:REP 22->76|PF12146|1.9e-05|36.4|55/79|Hydrolase_4| RP:SCP:NREP 1 RP:SCP:REP 6->263|1mt3A|7e-32|21.1|256/293|c.69.1.7| HM:SCP:REP 1->271|1bn7A_|1.3e-53|29.5|264/0|c.69.1.8|1/1|alpha/beta-Hydrolases| OP:NHOMO 532 OP:NHOMOORG 329 OP:PATTERN -----------------------2------1-------------------1---------------1- -11-5--1------311----2--1-------41111544---2-1------11-11---211-2-42-11---------1-2------------------21--121-----------------11-1111-1112334311131--12--------------1--1-1-------------2-1------1--------1--------2---11--11---1-12311122-----------------------------------11-----------------------------------------------------------------1-1-1-----------1--1-11-----1----1----1--1111-----1-433----1--111111111111-221112-3121-2--112-21211-3-3--113-221-111111111--------------------------------------116212321231142331--122421111121462243--32---1212-112------1-------------1-1-321------111--1121122--212271-1---------------------------11---------1--1--1-111111--111--------------1--1---------1-------------------------1-111------------------------------------------------1-----2-----1------------------323---2-345333235-322-------------222222-11111122122------------------------------------------------------------------ ---------------11-12222112211-------1111111---1-12111111111---------------------------------1---------------1------------------3-331-221----1-----1-----------2---------1----11---1---------21----2---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 269 STR:RPRED 99.3 SQ:SECSTR EcEEEccTccccEEEEEEEEcccEEEEEEccTTccGGGGTTTHHHHHTTEEEEEEccTTcGGGTTccccccHHHHHHHHHHHHHHTTcccEEEEEETHHHHHHHHHHHHcGGGEEEEEEEcccccccHHHHHHHHHHHHHHHHTTccccHHHHHHHHHTcHHHHHHHHHHHHHccccccHHHHHHTTcHccccccGGGGGGccccEEEEEETTcccccHHHHHHHHHHcTTcEEEEEETTccTTHHHHcHHHHHHHHHHHHHHcTccEE## DISOP:02AL 1-2, 267-271| PSIPRED cccccEEEEccEEEEEEEEcccccEEEEEccccccHHHHHHHHHHHHcccEEEEEccccccccccccccccHHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHHHHHcHHHHcEEEEEccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcHHHHHHHHHHHHccccHHHHHHHccccEEEEEccccccccHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHHHHHHHHcccccccc //