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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56885.1
DDBJ      :             putative acetylpolyamine aminohydrolase
Swiss-Prot:             

Homologs  Archaea  50/68 : Bacteria  429/915 : Eukaryota  198/199 : Viruses  0/175   --->[See Alignment]
c.42.1
:372 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->358 1zz0A PDBj e-113 55.4 %
:RPS:PDB   1->341 3c0zA PDBj 4e-69 29.2 %
:RPS:SCOP  1->333 3c0yA1  c.42.1.2 * 5e-67 31.2 %
:HMM:SCOP  3->338 1t64A_ c.42.1.2 * 2.3e-94 42.7 %
:RPS:PFM   37->315 PF00850 * Hist_deacetyl 4e-61 46.0 %
:HMM:PFM   34->330 PF00850 * Hist_deacetyl 1e-82 40.8 294/306  
:BLT:SWISS 6->358 HDAH_ALCSD e-112 55.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56885.1 GT:GENE BAD56885.1 GT:PRODUCT putative acetylpolyamine aminohydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2219305..2220423 GB:FROM 2219305 GB:TO 2220423 GB:DIRECTION + GB:PRODUCT putative acetylpolyamine aminohydrolase GB:PROTEIN_ID BAD56885.1 LENGTH 372 SQ:AASEQ MATTTGYIWNTLYGWADTGSGGVFPPSVDALTQPISHHVAHPDTKRRLHELICASGLIKSLHQLEPAPATRDDVLRVHDEAHYERILAESALPKGGDAGDGVSPFGNGGHHIALLAAGGAIEAVRAVADGTVTNAYALINPPGHHAERATGRGFCLFNNGAIAAAYALEVLGMQRVAIVDWDVHHGNGAQDIFRESARVLNISVHQDRCFPSDSGFRDERGSGAGFGYTINIPLPPGGGSGAYDYAFDTVVLPALRAYRPELIIVASGFDASMMDPLARMMLRSDGFRSLTRKMLDVADEVAGGRLACLQEGGYSPYYVPFCGLAVVEELAGVSTGIADAYQPILGAMGGDELLPHERAAVDAAAELVADIS GT:EXON 1|1-372:0| BL:SWS:NREP 1 BL:SWS:REP 6->358|HDAH_ALCSD|e-112|55.1|352/369| SEG 108->121|gghhiallaaggai| SEG 359->370|aavdaaaelvad| BL:PDB:NREP 1 BL:PDB:REP 6->358|1zz0A|e-113|55.4|352/367| RP:PDB:NREP 1 RP:PDB:REP 1->341|3c0zA|4e-69|29.2|325/383| RP:PFM:NREP 1 RP:PFM:REP 37->315|PF00850|4e-61|46.0|276/304|Hist_deacetyl| HM:PFM:NREP 1 HM:PFM:REP 34->330|PF00850|1e-82|40.8|294/306|Hist_deacetyl| RP:SCP:NREP 1 RP:SCP:REP 1->333|3c0yA1|5e-67|31.2|317/386|c.42.1.2| HM:SCP:REP 3->338|1t64A_|2.3e-94|42.7|309/364|c.42.1.2|1/1|Arginase/deacetylase| OP:NHOMO 2187 OP:NHOMOORG 677 OP:PATTERN 11121122322233331111111111111121--1-1-------1-224-1111111111----21-- -231-1---------11--------1----------2111111111111---111111--111-2111111-----------322111---------------1111-21--------------------------33333111121122221222211111111122222------------2112211--111111111111111111111111111111111------111111111111111111--11----------------------------------------------------------------------1------------------------------111111311-21--11---2113221-----122221111122111111111112-23312212151-211122222211211-12314444326--------2-----12-----------------------------11-2--34333333434155653312555544442322312222232221351412221111221111111-11122-2332121111111112111112-11-13222--------------------1--111111-23-2221111111-1-111-1111--1---1312-------------------------------------------111--11-----------------1----------------------------------11112-----------------------1-113333253422422111----------2111-11111111111111111111------1-112222------------------------------------11--1-1---11- 23334431B3313473444444444344434444444434344444434344332333344455555536555365555556666633-4654466655466577725I4BBHDG9964658A6QG8N6f*H3HAE5575D69B749964E23G7C8A9546475828477AA754AB8g987AAADFC3B99889A87 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 358 STR:RPRED 96.2 SQ:SECSTR cTTcEEEEccGGGGGcccTTcccccccTTTTcccGGGccccTHHHHHHHHHHHHTTcGGGcEEEccccccHHHHTTTccHHHHHHHHccccTTccccccccccccTTTHHHHHHHHHHHHHHHHHHHHTTcccEEEEccccccTTccTTcccTTccccHHHHHHHHHHHHcTTccEEEEEccccccHHHHHHHTTcTTEEEEEEEEcTccTTccccTTccccGGGTTcEEEEEccccccHHHHHHHHHHTHHHHHHHHcccEEEEEEccTTcTTcGGccccccHHHHHHHHHHHTHHHGTcGGGcEEEEEcccccHHHHHHHHHHHHHHHHTccccGGGcGHHHHHTTccccccHHHH############## DISOP:02AL 372-373| PSIPRED cccEEEEEEcHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHccccccEEEEEcccccHHHHHHcccHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccccccccccccEEEEHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHccccEEEEEEccccccccccccccccccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHcccEEEEEccccccccccccccEEcHHHHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHcccccccHHHccHHHHHHHHHHHc //