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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56888.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  6/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:165 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  15->58 2co5A1  a.4.5.48 * 3e-04 32.4 %
:HMM:SCOP  1->158 1yg2A_ a.4.5.61 * 8.8e-12 27.9 %
:HMM:PFM   15->61 PF03551 * PadR 2.6e-09 35.6 45/86  
:HMM:PFM   101->146 PF03457 * HA 0.00044 23.8 42/68  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56888.1 GT:GENE BAD56888.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2222281..2222778) GB:FROM 2222281 GB:TO 2222778 GB:DIRECTION - GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD56888.1 LENGTH 165 SQ:AASEQ MRADLESWGAHEWSNATSGSVYHALKSTAQAGLLREHETTPSTAGGPPRIEYELTDKGEQSYFALLREALSARDPRMDLLAAAVGFIEDLPRAEAVALLRRRAAAMAEWEASITAHLPPGTDLATWGPVGDVIGLWLHTARSRAEWTRNLLARLEAGAYRMAGES GT:EXON 1|1-165:0| SEG 90->111|lpraeavallrrraaamaewea| HM:PFM:NREP 2 HM:PFM:REP 15->61|PF03551|2.6e-09|35.6|45/86|PadR| HM:PFM:REP 101->146|PF03457|0.00044|23.8|42/68|HA| RP:SCP:NREP 1 RP:SCP:REP 15->58|2co5A1|3e-04|32.4|37/89|a.4.5.48| HM:SCP:REP 1->158|1yg2A_|8.8e-12|27.9|154/0|a.4.5.61|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 7 OP:NHOMOORG 6 OP:PATTERN -------------------------------------------------------------------- ------------------------------------2--------1--------------------1111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 4-6, 40-44, 163-165| PSIPRED ccHHHHHccHHHHccccccHHHHHHHHHHHHccEEEEccccccccccccEEEEEcHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEcccc //