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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56899.1
DDBJ      :             putative glycosyltransferase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  34/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.87.1
:379 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->312 3d0rB PDBj 5e-08 23.1 %
:RPS:PDB   1->315 3d0rB PDBj 5e-19 22.2 %
:RPS:SCOP  1->315 1iirA  c.87.1.5 * 4e-14 21.5 %
:HMM:SCOP  1->377 1rrvA_ c.87.1.5 * 4.8e-57 30.8 %
:RPS:PFM   263->315 PF00201 * UDPGT 4e-05 39.6 %
:HMM:PFM   214->346 PF04101 * Glyco_tran_28_C 2.9e-11 21.4 131/167  
:HMM:PFM   169->253 PF06722 * DUF1205 7.9e-11 35.4 82/97  
:HMM:PFM   4->131 PF03033 * Glyco_transf_28 2.2e-08 19.5 113/139  
:BLT:SWISS 201->312 ATG26_LEPMC 2e-07 33.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56899.1 GT:GENE BAD56899.1 GT:PRODUCT putative glycosyltransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2231773..2232912) GB:FROM 2231773 GB:TO 2232912 GB:DIRECTION - GB:PRODUCT putative glycosyltransferase GB:PROTEIN_ID BAD56899.1 LENGTH 379 SQ:AASEQ MRLLFSVTPAFGHLFPVLPLARAALAQGHQVGVLASAGMADTLAHELPGADHLPAGTMPLEFSLEAQRRTGLDVMQPTPEVIGEIFGGVRLEAAFDEAMAAAPGWRADTVIAEAFDTVGPAVAAALQLPWHQVGLGPALPEPIVAQITGAAAKRYSERGLDPTPPRCYIDPCPPAVQTPDLRRDVPRLPLRPQPHASPGSTWEPPTGQPGRPRVLVTLGTIFSDRAVLDEVVRAVASTGATVIATIGMAMREEQAAGQQVAHPESVHFVQFAPMEQLLSGIDLVVCAGGSGTVLAAMSRGIPLVIWPQGADQPINAARARAAGVALAVDTAAALTQAVDTALHDPALRAAAATAARQIAALPAPHDVLDEIIRLSSVTE GT:EXON 1|1-379:0| BL:SWS:NREP 1 BL:SWS:REP 201->312|ATG26_LEPMC|2e-07|33.9|112/1456| SEG 93->102|aafdeamaaa| SEG 179->192|pdlrrdvprlplrp| SEG 316->364|aararaagvalavdtaaaltqavdtalhdpalraaaataarqiaalpap| BL:PDB:NREP 1 BL:PDB:REP 1->312|3d0rB|5e-08|23.1|307/381| RP:PDB:NREP 1 RP:PDB:REP 1->315|3d0rB|5e-19|22.2|306/381| RP:PFM:NREP 1 RP:PFM:REP 263->315|PF00201|4e-05|39.6|53/278|UDPGT| HM:PFM:NREP 3 HM:PFM:REP 214->346|PF04101|2.9e-11|21.4|131/167|Glyco_tran_28_C| HM:PFM:REP 169->253|PF06722|7.9e-11|35.4|82/97|DUF1205| HM:PFM:REP 4->131|PF03033|2.2e-08|19.5|113/139|Glyco_transf_28| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00201|IPR002213| GO:PFM GO:0016758|"GO:transferase activity, transferring hexosyl groups"|PF00201|IPR002213| RP:SCP:NREP 1 RP:SCP:REP 1->315|1iirA|4e-14|21.5|289/382|c.87.1.5| HM:SCP:REP 1->377|1rrvA_|4.8e-57|30.8|351/0|c.87.1.5|1/1|UDP-Glycosyltransferase/glycogen phosphorylase| OP:NHOMO 42 OP:NHOMOORG 34 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1------2----------------1---3-3-----------------------------------------------------------------------------2-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2---------------------------------------------------------------------------------111-111---1----------1---------2-----1111111111111111---1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 315 STR:RPRED 83.1 SQ:SECSTR cEEEEEccccTTccGGGHHHHHHHHHTTcEEEEEEcHHTTTccEEEccTTccHHHHHHHHHHHcTTcTTTGGGcccccGGGGHHHHHHHHHHHHHHHHHHHHHHHcccEEEEETTcHHHHHHHHHHTccEEEEcccccccTTHHHHHHTTcHHHHHHHTcccccccEEEEcccGGGcccccTTEEEccccccccccccccccccccccccccEEEEEccHHHHHHGGGHHHHHHHTTccccEEEEcTTcccGGGccHHHHcccTTEEEcccccHHHHHTTEEEEEEcccTTHHHHHHHHTccEEEcccTTccccH################################################################ DISOP:02AL 354-358| PSIPRED cEEEEEccccHHHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHcccccccccccHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHHHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccHHHHHHHHHHHHHccccEEEEEcccccccccccccccccccEEEEEcccHHHHHHHccEEEEEccHHHHHHHHHHcccEEEEcccccHHHHHHHHHHcccEEEEccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcc //