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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56909.1
DDBJ      :             putative integrase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  4/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.163.1
:99 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  1->97 1a0pA2 d.163.1.1 * 2.3e-06 30.1 %
:HMM:PFM   3->96 PF00589 * Phage_integrase 8.2e-08 27.7 83/173  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56909.1 GT:GENE BAD56909.1 GT:PRODUCT putative integrase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2243863..2244162) GB:FROM 2243863 GB:TO 2244162 GB:DIRECTION - GB:PRODUCT putative integrase GB:PROTEIN_ID BAD56909.1 LENGTH 99 SQ:AASEQ MLFVACTATRIGEVSGCRVTDIDVDDWVWTLGRQTTPGPGGMQNKGTKDKRARKIPFIAELRPLVSRRTAAIGYKPEARLFVGPRGGSISTGVLRRATH GT:EXON 1|1-99:0| SEG 19->30|vtdidvddwvwt| HM:PFM:NREP 1 HM:PFM:REP 3->96|PF00589|8.2e-08|27.7|83/173|Phage_integrase| HM:SCP:REP 1->97|1a0pA2|2.3e-06|30.1|83/182|d.163.1.1|1/1|DNA breaking-rejoining enzymes| OP:NHOMO 4 OP:NHOMOORG 4 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1-----------------------1-----1-1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 93-99| PSIPRED cEEEEEHHHHHHHHHccEEEEEEcccEEEEEEcccccccccEEEEcccccEEEEcccHHHHHHHHHHHHHcccccccccEEEcccccEEcccccccccc //