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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56915.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  10/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.157.1
:228 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   117->194 1qh3A PDBj 8e-04 34.2 %
:RPS:PDB   94->162 3dabA PDBj 1e-05 12.9 %
:RPS:SCOP  30->212 1qh3A  d.157.1.2 * 2e-11 19.4 %
:HMM:SCOP  30->198 1xm8A_ d.157.1.2 * 2.4e-14 35.3 %
:HMM:PFM   83->198 PF00753 * Lactamase_B 1.3e-10 23.1 108/194  
:BLT:SWISS 41->200 GLO2_DECAR 8e-05 30.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56915.1 GT:GENE BAD56915.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2246773..2247459 GB:FROM 2246773 GB:TO 2247459 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56915.1 LENGTH 228 SQ:AASEQ MTTTSQSHDHTRTDSPLRQVLPDLWETPAFVVPGGPRTHAYLWTPPSGGNILFYSPGDEGPFEGVAALGGVERQYLSHQDEAGPMLRAVADRFGSRLHAPAPEAGQIGRFAAIDVPLSRRGTDDAGVEVIPTPGHSPGSTCYLVRGADDLTYLFTGDTLLRYADGVWRAGYVPGYSDKAGLRGALDVLATVRPDVVIASAFVEGAEGFHRIAPGTWSACLDEARAELG GT:EXON 1|1-228:0| BL:SWS:NREP 1 BL:SWS:REP 41->200|GLO2_DECAR|8e-05|30.8|143/265| BL:PDB:NREP 1 BL:PDB:REP 117->194|1qh3A|8e-04|34.2|73/260| RP:PDB:NREP 1 RP:PDB:REP 94->162|3dabA|1e-05|12.9|62/88| HM:PFM:NREP 1 HM:PFM:REP 83->198|PF00753|1.3e-10|23.1|108/194|Lactamase_B| RP:SCP:NREP 1 RP:SCP:REP 30->212|1qh3A|2e-11|19.4|175/260|d.157.1.2| HM:SCP:REP 30->198|1xm8A_|2.4e-14|35.3|156/0|d.157.1.2|1/1|Metallo-hydrolase/oxidoreductase| OP:NHOMO 10 OP:NHOMOORG 10 OP:PATTERN -------------------------------------------------------------------- ---------------------1---1------11111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 202 STR:RPRED 88.6 SQ:SECSTR ##########cEETEEEEEEETTEEEEEEEEccccEEEEEEEEEETTTEEEEEcccccHHHHHHHHHHHcEEEEEcccccHHHHTTHHHHHHTccccEEEcHHHHHHHHTTcccccccHHHHHHHHHHHTTccccccTTEEEcTGGGTTTTTcHHHHHHTccTccTTcccccTTccHHHHHHHHHHHHHHcccccEEEccTTHHHHHHHHHH################ DISOP:02AL 1-19| PSIPRED ccccccccccccccccHHHHHHHHHccccccccccccccEEEEEEccccEEEEEccccccHHHHHHHHccEEEEEEEEcccccHHHHHHHHHHccEEEEEHHHHHHcccccEEEEcccccEEcccccEEEEccccccccEEEEEEcccccEEEEEccEEEEccccccccccccccccHHHHHHHHHHHHHccccEEEcccccccccccccEEccHHHHHHHHHHHHcc //