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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56931.1
DDBJ      :             putative carbon-nitrogen hydrolase
Swiss-Prot:             

Homologs  Archaea  49/68 : Bacteria  659/915 : Eukaryota  187/199 : Viruses  0/175   --->[See Alignment]
d.160.1
:270 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   7->259 2w1vA PDBj 2e-28 34.1 %
:RPS:PDB   1->256 2e2kB PDBj 1e-47 17.7 %
:RPS:SCOP  1->256 1f89A  d.160.1.1 * 3e-48 30.6 %
:HMM:SCOP  1->256 1emsA2 d.160.1.1 * 4e-74 43.5 %
:RPS:PFM   4->171 PF00795 * CN_hydrolase 2e-19 44.2 %
:RPS:PFM   234->261 PF01564 * Spermine_synth 3e-05 64.3 %
:HMM:PFM   2->172 PF00795 * CN_hydrolase 9.5e-34 36.7 169/184  
:BLT:SWISS 2->259 YAUB_SCHPO 8e-33 34.5 %
:PROS 143->163|PS01227|UPF0012
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56931.1 GT:GENE BAD56931.1 GT:PRODUCT putative carbon-nitrogen hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2257471..2258283 GB:FROM 2257471 GB:TO 2258283 GB:DIRECTION + GB:PRODUCT putative carbon-nitrogen hydrolase GB:PROTEIN_ID BAD56931.1 LENGTH 270 SQ:AASEQ MKVALAQLASPDAETAAHRLERVRQSLAAFRADADLIVLPELWRVGYNHFADYQAAAETLDGPTVQVLAAVARERRCYLHIGSIVERADGDRLRNTAVLLDPDGRIAHRYSKIHVFGYRSEEARLLQPGRQIRVADTAFGRTAAITCYDLRFPGLWSELVDAGAEIVVVPAAWPAARLAHWRLLTGARAVDNQVIVIACNAVGTHNGVELGGHSRVVDPWGEVLGEAGAEEGFTVVDIDPAVVARTRAEFPVLADRLDDYRGLNRCEVPA GT:EXON 1|1-270:0| BL:SWS:NREP 1 BL:SWS:REP 2->259|YAUB_SCHPO|8e-33|34.5|255/322| PROS 143->163|PS01227|UPF0012|PDOC00943| SEG 221->232|gevlgeagaeeg| BL:PDB:NREP 1 BL:PDB:REP 7->259|2w1vA|2e-28|34.1|246/274| RP:PDB:NREP 1 RP:PDB:REP 1->256|2e2kB|1e-47|17.7|254/314| RP:PFM:NREP 2 RP:PFM:REP 4->171|PF00795|2e-19|44.2|163/171|CN_hydrolase| RP:PFM:REP 234->261|PF01564|3e-05|64.3|28/226|Spermine_synth| HM:PFM:NREP 1 HM:PFM:REP 2->172|PF00795|9.5e-34|36.7|169/184|CN_hydrolase| GO:PFM:NREP 3 GO:PFM GO:0006807|"GO:nitrogen compound metabolic process"|PF00795|IPR003010| GO:PFM GO:0016810|"GO:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"|PF00795|IPR003010| GO:PFM GO:0003824|"GO:catalytic activity"|PF01564|IPR001045| RP:SCP:NREP 1 RP:SCP:REP 1->256|1f89A|3e-48|30.6|252/271|d.160.1.1| HM:SCP:REP 1->256|1emsA2|4e-74|43.5|255/0|d.160.1.1|1/1|Carbon-nitrogen hydrolase| OP:NHOMO 1610 OP:NHOMOORG 895 OP:PATTERN 11111311-------1111111111111--11111--------2112221222-11111111111-12 1-2-311111111141111-1111181111113111228614133211111-323111--113-2215431---------1111-12122221222---1-1-1231111---------------2112111114311122---122111221112211111211121111111111111111-1------22111111111111111111111111113211--2222223311111111111111111111-------1-1-111111-1-11------------11---------------------------111---1-421211111111111211------1---11111133-121-1---11--1131112-----111441113212111111111112-12111112311-133111223222411121243244311--------31111121------------------------------23321122111222522223222422222212221122-11111111111111211111112111111111111111423121--1---1-33334322111111322-1-111111--111111111311-122123122121411111111111111121123---3224------22321231222222222-2112222222222221222222331113232333333323223222222223-322232233333---2-----111133353---------------11111121112243445555467552323121211212-1111111111411122223222341222--1-111111-------------------------------------11----1-1111 ----322-211-11133222433434122111111122222222222244234333112221222122222222222-2222223223-12131112211222221-32161523222211122522527B2-5372211222231222-21132111321222221367-11611232Y1113223343223121116 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 270 STR:RPRED 100.0 SQ:SECSTR EEEEEEEccccHHHHHHHHHHHHHHHHHHHcTTEEEEEccTTTTTcccTTTTcGGGccccccHHHHHHHHHHHHHTcEEEEEEEEccccTcccEEEEEEEcTTccEEEEEEcccccTTTTTccccccccccccEEcGGGcEEEEEEGGGGGcHHHHHHHHHTTccEEEEEEccccccHHHHHHHHHHHHHHHTcEEEEEEccccccccccccccEEEcTTccEEEEcccccEEEEEEEcHHHHHHHHHHccTTcHHHTTcccTTTTTccc DISOP:02AL 270-271| PSIPRED cEEEEEEccccccccHHHHHHHHHHHHHHHHccccEEEEccccccccccHHHHHHHHccccHHHHHHHHHHHHHcccEEEEEEEEEcccccEEEEEEEEEcccccEEEEEcccccccccccccEEEccccccEEEEEccEEEEEEccHHHccHHHHHHHHHccccEEEEccccccccHHHHHHHHHHHHHHcccEEEEEccccccccEEEccccEEEcccccEEEEcccccEEEEEEEcHHHHHHHHHHcccHHcccHHHEEEEEccccc //