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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56935.1
DDBJ      :             putative oxidoreductase
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  240/915 : Eukaryota  7/199 : Viruses  0/175   --->[See Alignment]
b.45.1
:174 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   16->159 1rz0A PDBj 2e-15 34.3 %
:RPS:PDB   13->162 2d36A PDBj 6e-30 22.3 %
:RPS:SCOP  11->162 1rz0A  b.45.1.2 * 8e-35 30.9 %
:HMM:SCOP  6->164 1uscA_ b.45.1.2 * 6e-49 40.8 %
:RPS:PFM   25->142 PF01613 * Flavin_Reduct 5e-16 39.0 %
:HMM:PFM   18->160 PF01613 * Flavin_Reduct 2.7e-40 37.8 143/155  
:BLT:SWISS 11->173 NTAB_CHEHE 2e-23 37.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56935.1 GT:GENE BAD56935.1 GT:PRODUCT putative oxidoreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2260805..2261329 GB:FROM 2260805 GB:TO 2261329 GB:DIRECTION + GB:PRODUCT putative oxidoreductase GB:PROTEIN_ID BAD56935.1 LENGTH 174 SQ:AASEQ MTLPAFHCPTPSDMRRSMGRFTTGVAIVSADDGTGNPCAMTISSLTSVSLEPPILLVSLTHGSRTTDAVEAGGRFAVSILGSRQEAIARRFATRGGARFEGLPVDLSRSGLPLIPDALAQLECRVHSAHDVGDHRVFYGEVVDMRWRDGTGLAFYSGRFGDFHDFGHDELPWLY GT:EXON 1|1-174:0| BL:SWS:NREP 1 BL:SWS:REP 11->173|NTAB_CHEHE|2e-23|37.0|162/322| SEG 86->99|aiarrfatrggarf| BL:PDB:NREP 1 BL:PDB:REP 16->159|1rz0A|2e-15|34.3|134/147| RP:PDB:NREP 1 RP:PDB:REP 13->162|2d36A|6e-30|22.3|148/154| RP:PFM:NREP 1 RP:PFM:REP 25->142|PF01613|5e-16|39.0|118/150|Flavin_Reduct| HM:PFM:NREP 1 HM:PFM:REP 18->160|PF01613|2.7e-40|37.8|143/155|Flavin_Reduct| RP:SCP:NREP 1 RP:SCP:REP 11->162|1rz0A|8e-35|30.9|149/153|b.45.1.2| HM:SCP:REP 6->164|1uscA_|6e-49|40.8|157/178|b.45.1.2|1/1|FMN-binding split barrel| OP:NHOMO 458 OP:NHOMOORG 250 OP:PATTERN -------1---------1-----------1-------------------------------------- --1-4--1--1---11111-12--21111111222273FD-123-1-1----321--1--232-3123441-----------3-------------------------1---------------------------22222---1--11-111---------111--1-1-------------11-12---3-----------------1--------11311-----------------------------------------------------------------------------------------------------------------------------1--1---------------------1--211--------31111----1-------------11-1--1-211-35532132234313221112312222221222222-----11111111111----1111111111111------3-1-411112334332111144212211214132542111122111121-131111-----------------42-----------------------------1--------------------------------------1---------------------------------------------------------------------1---------------------------------------------------------------3------1--------33323-3---1-11115133225331112------------------------11-----------------------------------------------------------1----------- ------------11---------------------------------------------------------------------------------------------1--2-----------------------------------------------1----11---------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 167 STR:RPRED 96.0 SQ:SECSTR HHTTTcccccccHHHHHHTTccEEcEEEEEEETTTEEEEEEEcccEEEEETTEEEEEEEETTTTTTHHHHTccEEEEEEEccHHHHHHHHHccTTTGGcGcccEEEcGGGcEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEccccccccEEETTEEEccccccc####### DISOP:02AL 1-6| PSIPRED ccccccccccHHHHHHHHHHHcccEEEEEEEcccccEEEEEEEEEEEEEccccEEEEEEcccccHHHHHHHccEEEEEEccHHHHHHHHHHccccHHHHcccccEEccccccEEcccEEEEEEEEEEEEEcccEEEEEEEEEEEEEcccccEEEEccccccccccccccccccc //