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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56943.1
DDBJ      :             putative dehydrogenase
Swiss-Prot:             

Homologs  Archaea  38/68 : Bacteria  666/915 : Eukaryota  187/199 : Viruses  1/175   --->[See Alignment]
b.35.1c.2.1
:370 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->370 1ee2A PDBj 6e-54 36.1 %
:RPS:PDB   1->370 1a71A PDBj 6e-57 32.5 %
:RPS:SCOP  1->189 1f8fA1  b.35.1.2 * 1e-32 31.3 %
:RPS:SCOP  160->334 1a71A2  c.2.1.1 * 4e-17 25.6 %
:HMM:SCOP  1->193 1dehA1 b.35.1.2 * 1.9e-69 47.9 %
:HMM:SCOP  159->335 1m6hA2 c.2.1.1 * 2.1e-37 39.2 %
:HMM:SCOP  323->370 1e3iA1 b.35.1.2 * 4.4e-10 39.6 %
:RPS:PFM   28->106 PF08240 * ADH_N 1e-18 51.9 %
:HMM:PFM   28->155 PF08240 * ADH_N 3.5e-29 43.0 107/109  
:HMM:PFM   197->327 PF00107 * ADH_zinc_N 1.1e-22 36.6 123/130  
:BLT:SWISS 1->370 ADHB_MYCTU 3e-97 45.1 %
:PROS 61->75|PS00059|ADH_ZINC
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56943.1 GT:GENE BAD56943.1 GT:PRODUCT putative dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2268480..2269592 GB:FROM 2268480 GB:TO 2269592 GB:DIRECTION + GB:PRODUCT putative dehydrogenase GB:PROTEIN_ID BAD56943.1 LENGTH 370 SQ:AASEQ MKSKAAVLWEPGAPWQIEELELDAPKYGEVLVELAASGLCHSDEHVRDGSVPVSFYPFIGGHEGAGVVREVGPGVTNLKPGDHVALGFIPACGRCRPCANGQSSICDLGAHLLDGYQVSDGTARHHVRGKDAGILCLLGTFAPYTVVNEASCVKITDDVPLDKAALVGCGVTTGWGSSVYAAGVSAGETVVVLGMGGVGCGAVQGAALAGARHVVLVDPSPVKREQAKVFGATHAVATVEEALPLVQDLTWGYLADKVLITVGVASGALIGQAMSLVAKGGVCVNVSVGDLETSDVTLNLFDLTAMRKTLKGAWFGNANIRFDIPHLLRLYMEGQLKLDEMITRTYTLEQVNEGYEAMRNAENVKGLIVY GT:EXON 1|1-370:0| BL:SWS:NREP 1 BL:SWS:REP 1->370|ADHB_MYCTU|3e-97|45.1|370/375| PROS 61->75|PS00059|ADH_ZINC|PDOC00058| SEG 190->211|vvvlgmggvgcgavqgaalaga| BL:PDB:NREP 1 BL:PDB:REP 1->370|1ee2A|6e-54|36.1|360/373| RP:PDB:NREP 1 RP:PDB:REP 1->370|1a71A|6e-57|32.5|366/374| RP:PFM:NREP 1 RP:PFM:REP 28->106|PF08240|1e-18|51.9|79/108|ADH_N| HM:PFM:NREP 2 HM:PFM:REP 28->155|PF08240|3.5e-29|43.0|107/109|ADH_N| HM:PFM:REP 197->327|PF00107|1.1e-22|36.6|123/130|ADH_zinc_N| GO:PFM:NREP 1 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF08240|IPR013154| RP:SCP:NREP 2 RP:SCP:REP 1->189|1f8fA1|1e-32|31.3|182/188|b.35.1.2| RP:SCP:REP 160->334|1a71A2|4e-17|25.6|172/176|c.2.1.1| HM:SCP:REP 1->193|1dehA1|1.9e-69|47.9|192/0|b.35.1.2|1/1|GroES-like| HM:SCP:REP 159->335|1m6hA2|2.1e-37|39.2|171/0|c.2.1.1|1/1|NAD(P)-binding Rossmann-fold domains| HM:SCP:REP 323->370|1e3iA1|4.4e-10|39.6|48/227|b.35.1.2|2/2|GroES-like| OP:NHOMO 4016 OP:NHOMOORG 892 OP:PATTERN 11--1-1387786864-441121-6---1242----------------1-221---1-1112111-13 446-831634611269855-5D11BQ666668BCEDBGLM-946825311-187B524112372B4GE9A41111-2-----7-1111--11-1-----1-3-4-41231--------------------------14411---284336222--11---12-12-444511----1------3133321-72733333333134433493553433323-142133333224111111111211112123351-4--2-6---1155211112252213221222111111111111112221222221222211111111121-14111-11111-52--------1----1--11-1212--11112--15136444-----6588B4269624533433443334-74226534435-9CC7GFDCDAAF342526345356534444444443544-122------------------------------295321111399988977576887A8988356874875--33933343532233323-111111-2222231432-31-------------232111-1-33947723-----111111---1----------33221254329512322223232222322222---22--------26242249778976899-7A8987697879899899478657332646366766665653565423316--333333333333---2-----3222212962224-2--121-11-22324-41314153553635446434445211212111-1222-----2211134543442332111---3111111--------1--------31--1-------1------1----111-113- ----713-21--122DFBEFEMELLJE9935665559A88877664ECAGCFXP8C86575841415223132323323423333363-CHCF3E2B674726756-342F5747845424582784I3Hh9-B7G844442263434-328384B37D68514532124546-22543G21332BGUYCJK43NKHD3 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 370 STR:RPRED 100.0 SQ:SECSTR EEEEEEEcccTTcccEEEEEEEccccTTEEEEEEEEEEccHHHHHHHHTccccccccccccccEEEEEEEEcTTcccccTTcEEEEcccccccccHHHHcccccccTTccccccccccTTccccEEETTEEEcccTTTcccccEEEEEGGGEEEccTTccHHHHGGGGTHHHHHHHHHHTTTcccTTcEEEEEcccHHHHHHHHHHHHTTccEEEEEcccGGGHHHHHHHTccEEEcGGGccccHHHHHHTTccccEEEEccccHcHHHHHHHHHHccTTTcEEEEccccccTTccccccTHHHHTTcEEEEccGGGccHHHHHHHHHHHHHTTccccGGGEEEEEEGGGHHHHHHHHHTTcccEEEEEc DISOP:02AL 370-371| PSIPRED ccEEEEEEEcccccEEEEEEEcccccccEEEEEEEEEEEccccEEEEEcccccccccEEccccccEEEEEEcccccccccccEEEEcccccccccHHHccccccccccccccccccccccccccccccccccccccccccccEEEEEcHHHEEEccccccHHHHcccccHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHcccEEEcccccHHHHHHHHHccccccEEEEccccccHHHHHHHHHHHccccEEEEEcccccccccccccHHHHHHccEEEEEEEEcccccHHHHHHHHHHHHHcccccccEEEEEEEHHHHHHHHHHHHcccccEEEEEc //