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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56948.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  61/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.80.4
:229 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  46->194 1ea0A1  b.80.4.1 * 3e-21 18.9 %
:HMM:SCOP  7->219 1ea0A1 b.80.4.1 * 9.6e-38 29.7 %
:RPS:PFM   47->176 PF01493 * GXGXG 1e-05 31.7 %
:HMM:PFM   52->114 PF01493 * GXGXG 1.4e-12 38.1 63/202  
:HMM:PFM   105->180 PF01493 * GXGXG 4.7e-11 34.2 76/202  
:BLT:SWISS 9->229 GLXC_RHIME 2e-63 57.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56948.1 GT:GENE BAD56948.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2274400..2275089) GB:FROM 2274400 GB:TO 2275089 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56948.1 LENGTH 229 SQ:AASEQ MSTVAPVRLDVTASGAREINALLHGPDAPRRLTLTEPRGAHALACGLTDDLEVTVEGHVGYYCAGMNQRASVTVRGNAGVGVAENMMSGTVRVTGDASQSAGATAHGGLLVIEGNAAARCGISMKGVDIVVGGDIGHMSAFMGQAGRLVVCGDAGEALGDSLYEARLYVRGTVASLGADCVAKPMRAEHLAELRDLLAAAGFDADPADFTRYGSARTLYNFHVDNAGAY GT:EXON 1|1-229:0| BL:SWS:NREP 1 BL:SWS:REP 9->229|GLXC_RHIME|2e-63|57.0|221/228| SEG 126->136|gvdivvggdig| SEG 195->209|dllaaagfdadpadf| RP:PFM:NREP 1 RP:PFM:REP 47->176|PF01493|1e-05|31.7|123/195|GXGXG| HM:PFM:NREP 2 HM:PFM:REP 52->114|PF01493|1.4e-12|38.1|63/202|GXGXG| HM:PFM:REP 105->180|PF01493|4.7e-11|34.2|76/202|GXGXG| GO:PFM:NREP 3 GO:PFM GO:0008152|"GO:metabolic process"|PF01493|IPR002489| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01493|IPR002489| GO:PFM GO:0055114|"GO:oxidation reduction"|PF01493|IPR002489| RP:SCP:NREP 1 RP:SCP:REP 46->194|1ea0A1|3e-21|18.9|148/270|b.80.4.1| HM:SCP:REP 7->219|1ea0A1|9.6e-38|29.7|212/0|b.80.4.1|1/1|Alpha subunit of glutamate synthase, C-terminal domain| OP:NHOMO 69 OP:NHOMOORG 66 OP:PATTERN ---1----------------------------112------------------1-------------- ---------------------1---1------11111-11-1-----------1----------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------1---------1----------1-11------1-------------11-11-11-1--11111111112111---1------1-1------------1--------------------------------2------------------------1-----------1------1---------1----1-1-------------1------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------1------------11-1---111---------1--------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-3, 227-229| PSIPRED cccccEEEEEcccccHHHHHHHHHHcccccEEEEEccccEEEEccccccccEEEEEEccccHHHHHccccEEEEEEccccHHcccccccEEEEEccccHHHHHHccccEEEEEEccccEEEEEEcEEEEEEEcccccHHHHHHcccEEEEEccccHHHcccccccEEEEEEccccccccEEEEcccHHHHHHHHHHHHHccccccHHHHHHccccEEEEEEEEcccccc //